Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 MTND4LP22-201ENST00000508209 276 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 VWA8P1-201ENST00000510889 176 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 SNORD84-203ENST00000584275 78 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AL591034.3-201ENST00000605511 685 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 ATP5A1P2-202ENST00000616464 443 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 ZYXP1-201ENST00000617638 118 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 MIR8059-201ENST00000620427 81 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 PLCE1P1-201ENST00000622094 305 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AC007546.2-201ENST00000623996 360 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 MIR492-201ENST00000638676 116 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.49□□□□□ -1.69
RNF38Q9H0F5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF38Q9H0F5 AL365440.1-201ENST00000436135 2167 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 RNA5SP235-201ENST00000365411 114 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 MIR135A2-201ENST00000384854 100 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 NDUFS5P1-201ENST00000405668 289 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 RNA5SP317-201ENST00000410176 116 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 RNU4-6P-201ENST00000410804 122 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 SNORA74C-2-201ENST00000411179 201 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 RNA5SP311-201ENST00000411290 116 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 DPH3P2-201ENST00000422618 250 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 SNAP23P1-201ENST00000433229 246 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 FABP5P13-201ENST00000452144 328 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 SNORD97-201ENST00000459187 142 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 U8.20-201ENST00000459445 131 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AC128713.1-201ENST00000471495 306 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 RPL7P23-201ENST00000493874 747 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AC015911.1-201ENST00000495111 156 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AC110794.1-201ENST00000505816 425 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 RNA5SP315-201ENST00000516340 116 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 RNA5SP312-201ENST00000517068 116 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 RPL23AP84-201ENST00000571193 464 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 GABPAP-201ENST00000419271 1356 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF38Q9H0F5 MAPK10-320ENST00000641462 6696 ntBASIC4.48□□□□□ -1.69
RNF38Q9H0F5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 MIR448-201ENST00000362131 111 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 Y_RNA.252-201ENST00000364556 101 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 RNU6-593P-201ENST00000364716 112 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 Y_RNA.455-201ENST00000384230 98 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 RNU1-13P-201ENST00000384499 162 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 Y_RNA.574-201ENST00000384766 95 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 SNORD96B-201ENST00000386148 79 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 SNORD70.1-201ENST00000391007 85 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AL022722.2-201ENST00000402519 180 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 HDGFP1-201ENST00000405943 252 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 RN7SKP167-201ENST00000411047 285 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 UBE2FP1-201ENST00000416536 447 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 EI24P1-201ENST00000416584 867 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF38Q9H0F5 EIF4EP1-201ENST00000422311 642 ntBASIC4.47□□□□□ -1.69
RNF38Q9H0F5 AL121871.1-201ENST00000443413 436 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms