Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
CNTNAP4Q9C0A0 RNU6-1284P-201ENST00000363701 100 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 RNU6-128P-201ENST00000383976 107 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 RNU6-754P-201ENST00000391166 107 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 SOD2P1-201ENST00000396543 562 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 MIR450B-201ENST00000401182 78 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 Y_RNA.646-201ENST00000410980 101 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 HMGB3P2-201ENST00000411913 584 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AL035423.1-201ENST00000420331 213 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AL590609.2-201ENST00000421430 368 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 RPL23AP69-201ENST00000431134 458 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC127537.2-201ENST00000439258 465 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 RPL21P8-201ENST00000465083 535 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC008526.1-201ENST00000509149 338 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC104619.4-201ENST00000510773 249 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 SNORA70.24-201ENST00000517233 118 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC100870.1-201ENST00000522035 505 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC124068.1-201ENST00000563131 678 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC023813.4-201ENST00000607580 580 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC004696.1-201ENST00000614345 607 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 PISRT1.1-201ENST00000616930 107 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 MIR7975-201ENST00000619350 68 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AL162373.1-201ENST00000620433 407 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AL031595.2-201ENST00000624215 19071 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC093775.1-201ENST00000624154 1868 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 ZNF734P-201ENST00000419494 1534 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 GABPAP-201ENST00000419271 1356 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 MTND5P27-201ENST00000428871 1720 ntBASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.99□□□□□ -1.61
CNTNAP4Q9C0A0 RNU6-379P-201ENST00000363813 104 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 Y_RNA.364-201ENST00000365532 101 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RNU6-26P-201ENST00000383985 107 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RNU2-36P-201ENST00000410361 191 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RNU6-516P-201ENST00000411381 104 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 BX323014.1-201ENST00000412876 237 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AC114491.1-201ENST00000416095 246 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AC093151.1-201ENST00000427711 313 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AC096644.2-201ENST00000429278 159 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AL159987.2-201ENST00000432754 307 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 HSPD1P21-201ENST00000436541 245 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RPL7P28-201ENST00000437739 740 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AC005094.1-201ENST00000440420 368 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RPL21P23-201ENST00000446654 460 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 SCARNA18-201ENST00000459004 134 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 TRBV1-201ENST00000476502 284 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RN7SL293P-201ENST00000481765 281 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RN7SL271P-201ENST00000487601 295 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AC074250.1-201ENST00000511117 192 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RNU6-1016P-201ENST00000516689 94 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RNU6-64P-201ENST00000517119 105 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RN7SKP40-201ENST00000517211 242 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AC009812.2-201ENST00000517657 457 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 MIR3922-201ENST00000585192 84 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AL355812.1-201ENST00000603215 216 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AP001642.1-201ENST00000624727 2117 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 AC015813.6-201ENST00000624409 5808 ntBASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CNTNAP4Q9C0A0 Y_RNA.399-201ENST00000383955 105 ntBASIC4.97□□□□□ -1.61
CNTNAP4Q9C0A0 RNU6-432P-201ENST00000384196 109 ntBASIC4.97□□□□□ -1.61
CNTNAP4Q9C0A0 Y_RNA.463-201ENST00000384271 102 ntBASIC4.97□□□□□ -1.61
CNTNAP4Q9C0A0 RNA5SP107-201ENST00000411358 122 ntBASIC4.97□□□□□ -1.61
CNTNAP4Q9C0A0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.97□□□□□ -1.61
CNTNAP4Q9C0A0 RPS23P10-201ENST00000416185 486 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms