Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.66□□□□□ -2.14
SCAPERQ9BY12 AC092474.3-201ENST00000603022 568 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SCAPERQ9BY12 SNORA38-201ENST00000363946 132 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 AL445687.1-201ENST00000439946 251 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 AL500527.1-201ENST00000448532 255 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 HSPE1P24-201ENST00000450782 238 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 RFC5P1-201ENST00000454419 874 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.66□□□□□ -2.14
SCAPERQ9BY12 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.66□□□□□ -2.14
SCAPERQ9BY12 RNU6-319P-201ENST00000516025 108 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.66□□□□□ -2.14
SCAPERQ9BY12 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.66□□□□□ -2.14
SCAPERQ9BY12 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SCAPERQ9BY12 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.66□□□□□ -2.14
SCAPERQ9BY12 AC211469.2-201ENST00000605461 205 ntBASIC1.66□□□□□ -2.14
SCAPERQ9BY12 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.66□□□□□ -2.14
SCAPERQ9BY12 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.65□□□□□ -2.15
SCAPERQ9BY12 SNORA1.3-201ENST00000384676 136 ntBASIC1.65□□□□□ -2.15
SCAPERQ9BY12 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SCAPERQ9BY12 RNA5SP465-201ENST00000391195 109 ntBASIC1.65□□□□□ -2.15
SCAPERQ9BY12 POLR2J4-204ENST00000418424 324 ntBASIC1.65□□□□□ -2.15
SCAPERQ9BY12 AC026801.1-201ENST00000497178 464 ntBASIC1.65□□□□□ -2.15
SCAPERQ9BY12 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.65□□□□□ -2.15
SCAPERQ9BY12 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.65□□□□□ -2.15
SCAPERQ9BY12 VN1R107P-201ENST00000601784 209 ntBASIC1.65□□□□□ -2.15
SCAPERQ9BY12 AL136363.1-201ENST00000605349 337 ntBASIC1.65□□□□□ -2.15
SCAPERQ9BY12 AC090525.3-201ENST00000605601 189 ntBASIC1.65□□□□□ -2.15
SCAPERQ9BY12 MIR98-201ENST00000606724 119 ntBASIC1.65□□□□□ -2.15
SCAPERQ9BY12 AC005332.10-201ENST00000612725 619 ntBASIC1.65□□□□□ -2.15
SCAPERQ9BY12 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.65□□□□□ -2.15
SCAPERQ9BY12 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
SCAPERQ9BY12 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.64□□□□□ -2.15
SCAPERQ9BY12 RNU1-62P-201ENST00000362599 164 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 SNORA16B-201ENST00000364674 135 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 Y_RNA.374-201ENST00000365606 101 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 RPS4XP3-201ENST00000398541 413 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.64□□□□□ -2.15
SCAPERQ9BY12 AC007560.1-201ENST00000426912 237 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 MTCYBP34-201ENST00000439552 670 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 snoU13.7-201ENST00000459220 104 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 AL121769.1-201ENST00000469473 401 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 AC092902.1-201ENST00000486999 259 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.64□□□□□ -2.15
SCAPERQ9BY12 AL121821.2-201ENST00000556081 394 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC1.64□□□□□ -2.15
SCAPERQ9BY12 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.64□□□□□ -2.15
SCAPERQ9BY12 AP001486.3-201ENST00000615334 372 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 AC095031.1-201ENST00000623685 672 ntBASIC1.64□□□□□ -2.15
SCAPERQ9BY12 RNU4-41P-201ENST00000364426 143 ntBASIC1.63□□□□□ -2.15
SCAPERQ9BY12 RNU6-1251P-201ENST00000364502 107 ntBASIC1.63□□□□□ -2.15
SCAPERQ9BY12 ERHP2-201ENST00000402323 299 ntBASIC1.63□□□□□ -2.15
SCAPERQ9BY12 HMGB1P49-201ENST00000418882 569 ntBASIC1.63□□□□□ -2.15
SCAPERQ9BY12 RN7SL793P-201ENST00000583259 296 ntBASIC1.63□□□□□ -2.15
SCAPERQ9BY12 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.63□□□□□ -2.15
SCAPERQ9BY12 RNU6-1105P-201ENST00000384774 107 ntBASIC1.62□□□□□ -2.15
SCAPERQ9BY12 SNORD65-201ENST00000391079 73 ntBASIC1.62□□□□□ -2.15
SCAPERQ9BY12 RPL7P30-201ENST00000420888 709 ntBASIC1.62□□□□□ -2.15
SCAPERQ9BY12 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.62□□□□□ -2.15
SCAPERQ9BY12 AC118469.1-201ENST00000442943 488 ntBASIC1.62□□□□□ -2.15
SCAPERQ9BY12 AC107954.1-201ENST00000565906 727 ntBASIC1.62□□□□□ -2.15
SCAPERQ9BY12 MTCO2P22-201ENST00000603246 681 ntBASIC1.62□□□□□ -2.15
SCAPERQ9BY12 AL445493.3-201ENST00000619568 477 ntBASIC1.62□□□□□ -2.15
SCAPERQ9BY12 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SCAPERQ9BY12 AC111188.2-201ENST00000529697 1387 ntBASIC1.62□□□□□ -2.15
SCAPERQ9BY12 AC068700.1-201ENST00000565862 3754 ntBASIC1.62□□□□□ -2.15
SCAPERQ9BY12 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SCAPERQ9BY12 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
SCAPERQ9BY12 SNORA3A-201ENST00000364113 130 ntBASIC1.61□□□□□ -2.15
SCAPERQ9BY12 U8.14-201ENST00000390843 143 ntBASIC1.61□□□□□ -2.15
SCAPERQ9BY12 RNU6-837P-201ENST00000391056 108 ntBASIC1.61□□□□□ -2.15
SCAPERQ9BY12 AP000949.1-201ENST00000438328 629 ntBASIC1.61□□□□□ -2.15
SCAPERQ9BY12 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.61□□□□□ -2.15
SCAPERQ9BY12 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.61□□□□□ -2.15
SCAPERQ9BY12 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.61□□□□□ -2.15
SCAPERQ9BY12 RPL30P12-201ENST00000474666 353 ntBASIC1.61□□□□□ -2.15
SCAPERQ9BY12 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
SCAPERQ9BY12 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.61□□□□□ -2.15
SCAPERQ9BY12 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.61□□□□□ -2.15
SCAPERQ9BY12 AL449363.1-201ENST00000617815 186 ntBASIC1.61□□□□□ -2.15
SCAPERQ9BY12 AC068620.4-201ENST00000636730 1182 ntBASIC1.61□□□□□ -2.15
SCAPERQ9BY12 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.61□□□□□ -2.15
SCAPERQ9BY12 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
SCAPERQ9BY12 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
SCAPERQ9BY12 AL161449.1-201ENST00000414531 1199 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 AC234781.2-201ENST00000426370 994 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 RNU7-26P-201ENST00000458980 63 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 PABPC1P3-201ENST00000469174 459 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 RNU6-405P-201ENST00000516637 110 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 RNU6-467P-201ENST00000517027 110 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 AC087272.1-201ENST00000523624 533 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.6□□□□□ -2.15
SCAPERQ9BY12 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.6□□□□□ -2.15
SCAPERQ9BY12 AC023825.1-201ENST00000566704 1030 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 MIR3973-201ENST00000579824 107 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 AC003001.2-201ENST00000616294 831 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 AC092140.2-201ENST00000618027 521 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 AC068880.5-201ENST00000624331 290 ntBASIC1.6□□□□□ -2.15
SCAPERQ9BY12 DDX10P1-201ENST00000448545 1933 ntBASIC1.59□□□□□ -2.15
SCAPERQ9BY12 AC092745.2-202ENST00000411880 369 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms