Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 RNU5E-8P-201ENST00000363502 116 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 RNU6-359P-201ENST00000365466 108 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 RNU6-1207P-201ENST00000384343 107 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 MIR514A1-201ENST00000385133 98 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 MIR1284-201ENST00000408337 120 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 RNU4-22P-201ENST00000411058 166 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 USP9YP27-201ENST00000418455 438 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 TAAR7P-201ENST00000436141 242 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 OR10R1P-201ENST00000441524 1141 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 RPL7P12-201ENST00000446719 750 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 EXOSC3P1-201ENST00000448649 500 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 MTND1P31-201ENST00000449206 961 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 FCF1P6-201ENST00000456841 595 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 RNU6-420P-201ENST00000458780 107 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 snoU13.28-201ENST00000459235 104 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 RPS29P12-201ENST00000460178 152 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 GZMAP1-201ENST00000503054 631 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AC007115.1-201ENST00000546853 234 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 ISCA1P3-201ENST00000577104 373 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 MTND3P19-201ENST00000603825 345 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AC013553.2-201ENST00000604244 589 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AC131235.4-201ENST00000609288 620 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AL161629.2-201ENST00000615347 275 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AC093591.3-201ENST00000634516 308 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AC116618.1-201ENST00000634617 774 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 AL445984.1-201ENST00000637834 659 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 PABPC1P9-201ENST00000426076 1612 ntBASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RPAP1Q9BWH6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 RNU6-270P-201ENST00000364131 105 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 RNU6-1078P-201ENST00000364522 103 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 RNU6-621P-201ENST00000364752 109 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 SNORD116.1-201ENST00000365628 92 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 MIR221-201ENST00000385135 110 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 MIR620-201ENST00000385232 95 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 ANAPC10P1-201ENST00000395991 556 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 AL356057.2-201ENST00000403318 432 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 Z98742.2-201ENST00000431564 187 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 MTND2P24-201ENST00000453434 806 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 HMGN2P23-201ENST00000456759 269 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 AC068587.2-201ENST00000478386 781 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 AC104435.1-201ENST00000483483 166 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 AC109445.1-201ENST00000512356 383 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 RNU6-928P-201ENST00000516876 104 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 HMGB1P14-201ENST00000557424 591 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 AL133507.1-201ENST00000605269 557 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 AC107075.1-201ENST00000613695 314 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 OR4G2P-202ENST00000641004 1759 ntBASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.66□□□□□ -1.98
RPAP1Q9BWH6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 RNU6-97P-201ENST00000363387 104 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 RNU6-198P-201ENST00000384258 104 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 MIR325-201ENST00000385260 98 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AL953862.1-201ENST00000423016 168 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 HMGN2P30-201ENST00000423237 256 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 WARS2P1-201ENST00000429678 537 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AC005410.1-202ENST00000460347 485 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 MTND4P2-201ENST00000507767 1203 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AC116353.3-201ENST00000511215 249 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 RAC1P5-201ENST00000512182 576 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 TTC39CP1-201ENST00000512513 755 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 SCARNA15.2-201ENST00000516409 127 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AP003497.1-201ENST00000528472 562 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AL132857.1-201ENST00000555180 708 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AMZ2P1-203ENST00000565833 850 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AP001269.3-201ENST00000588718 329 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AC034102.8-201ENST00000615146 484 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 AL353997.5-201ENST00000618886 171 ntBASIC2.65□□□□□ -1.98
RPAP1Q9BWH6 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms