Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC103710.1-201ENST00000610003 901 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC090970.3-201ENST00000612566 866 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC112204.3-201ENST00000623822 332 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 DDX10P1-201ENST00000448545 1933 ntBASIC2.8□□□□□ -1.96
CCDC28BQ9BUN5 AC009812.4-201ENST00000569134 1805 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 OR5H15-201ENST00000383696 930 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 SNORA54-201ENST00000384281 123 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 MRPL42P2-201ENST00000403169 426 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 CCNG1P1-201ENST00000406783 885 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 RNU2-16P-201ENST00000410712 136 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 TIMM9P1-201ENST00000436122 256 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 RPS24P1-201ENST00000438550 371 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 RABEPKP1-201ENST00000440529 1026 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AL022238.1-201ENST00000442557 355 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC244505.5-201ENST00000443639 207 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 Z96811.1-201ENST00000445880 108 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AL359073.1-201ENST00000448036 403 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 MTND1P12-201ENST00000455231 147 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 MTCO2P29-201ENST00000465212 189 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC034236.1-201ENST00000469891 373 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AP000852.1-201ENST00000472460 573 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC004062.1-201ENST00000509926 645 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 DEFB108D-201ENST00000527787 222 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 HIGD1AP5-201ENST00000529959 259 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AL133271.1-201ENST00000538229 291 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 MIR4528-201ENST00000577763 90 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 MIR3118-1-201ENST00000581787 76 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC006130.2-201ENST00000586202 326 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 HMGN1P30-201ENST00000589286 268 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC087683.1-201ENST00000591187 441 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC090578.1-201ENST00000604955 591 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AP000254.1-201ENST00000609934 520 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC091304.9-201ENST00000612091 226 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AL355810.1-201ENST00000614629 552 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AL450472.3-201ENST00000615578 367 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 AC019226.1-201ENST00000625666 515 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 PISRT1-201ENST00000626175 531 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 ZNF271P-202ENST00000465539 1970 ntBASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC28BQ9BUN5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 GNG5P1-201ENST00000255500 204 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 SNORD56.5-201ENST00000364281 72 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-1042P-201ENST00000384204 107 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-278P-201ENST00000390945 109 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AL109755.1-201ENST00000401791 649 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 RPS3AP24-201ENST00000407896 734 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 RNU2-62P-201ENST00000410868 191 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 RAB28P1-201ENST00000411517 641 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 MTCO3P41-201ENST00000414801 328 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 PPP1R11P2-201ENST00000423543 382 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC009961.2-201ENST00000435771 251 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC006028.1-201ENST00000438379 402 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC073614.1-201ENST00000438690 650 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AL031667.1-201ENST00000440222 725 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC093156.1-201ENST00000440382 670 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 UBBP3-201ENST00000445497 241 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC073901.1-201ENST00000462471 408 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 AC135721.1-201ENST00000497954 479 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 VN1R104P-201ENST00000505115 1009 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 NDUFB4P2-201ENST00000509515 391 ntBASIC2.78□□□□□ -1.96
CCDC28BQ9BUN5 RNU6-405P-201ENST00000516637 110 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms