Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.59□□□□□ -1.83
MEIS3Q99687 EIF4BP1-201ENST00000554881 351 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 SUB1P2-201ENST00000556401 297 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AL138976.2-201ENST00000563989 694 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.59□□□□□ -1.83
MEIS3Q99687 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.59□□□□□ -1.83
MEIS3Q99687 MIR4512-201ENST00000583257 77 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.59□□□□□ -1.83
MEIS3Q99687 AC044792.1-201ENST00000593294 196 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.59□□□□□ -1.83
MEIS3Q99687 AC012507.3-201ENST00000603556 477 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 RMST_3.1-201ENST00000611651 109 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC068722.2-201ENST00000618734 544 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC024614.3-201ENST00000637860 256 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AC138915.3-201ENST00000562908 1389 ntBASIC3.59□□□□□ -1.83
MEIS3Q99687 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.59□□□□□ -1.84
MEIS3Q99687 AL592437.2-201ENST00000421655 2434 ntBASIC3.59□□□□□ -1.84
MEIS3Q99687 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
MEIS3Q99687 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
MEIS3Q99687 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
MEIS3Q99687 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
MEIS3Q99687 SNORD56.2-201ENST00000363242 71 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 MIR181A2-201ENST00000384863 110 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 SNORD115.1-201ENST00000391109 76 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.58□□□□□ -1.84
MEIS3Q99687 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.58□□□□□ -1.84
MEIS3Q99687 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.58□□□□□ -1.84
MEIS3Q99687 TIMM9P3-201ENST00000428659 274 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 AC133104.1-201ENST00000429100 218 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.58□□□□□ -1.84
MEIS3Q99687 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.58□□□□□ -1.84
MEIS3Q99687 AC010493.1-201ENST00000513479 292 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.58□□□□□ -1.84
MEIS3Q99687 RNU6-1003P-201ENST00000517099 105 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.58□□□□□ -1.84
MEIS3Q99687 COX6CP8-201ENST00000522620 226 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.58□□□□□ -1.84
MEIS3Q99687 AC008127.2-201ENST00000549925 1075 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 AC007424.1-203ENST00000554613 687 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 MIR3682-201ENST00000581338 84 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.58□□□□□ -1.84
MEIS3Q99687 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.58□□□□□ -1.84
MEIS3Q99687 AC024153.1-201ENST00000603103 365 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 AC245014.2-201ENST00000603689 287 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 AC246785.4-201ENST00000605374 287 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.58□□□□□ -1.84
MEIS3Q99687 AC005858.4-201ENST00000623191 700 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 AL137790.1-201ENST00000634283 177 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 MTND4P23-201ENST00000447723 1363 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MEIS3Q99687 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MEIS3Q99687 AC134882.1-201ENST00000603738 1676 ntBASIC3.58□□□□□ -1.84
MEIS3Q99687 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MEIS3Q99687 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MEIS3Q99687 AC022031.1-201ENST00000585985 2593 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 RNA5SP391-201ENST00000363456 119 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 Y_RNA.263-201ENST00000364659 114 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 Y_RNA.279-201ENST00000364763 95 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 RNU6-744P-201ENST00000365557 107 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 RNU6-1293P-201ENST00000384077 107 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 RNU6-1316P-201ENST00000384242 108 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MEIS3Q99687 AL031679.1-201ENST00000400616 525 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 HMGB1P17-201ENST00000403495 628 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 RNU6-908P-201ENST00000410160 94 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 EEF1A1P40-201ENST00000412883 573 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 AL451074.5-201ENST00000415894 435 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 MTND3P17-201ENST00000416968 344 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 AC008850.1-201ENST00000427546 362 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.57□□□□□ -1.84
MEIS3Q99687 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.57□□□□□ -1.84
MEIS3Q99687 MTCO3P2-201ENST00000457365 171 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 S100A11P1-201ENST00000477525 312 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 AP001025.2-201ENST00000490908 477 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.57□□□□□ -1.84
MEIS3Q99687 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MEIS3Q99687 Y_RNA.675-201ENST00000516389 149 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 SCARNA13-201ENST00000516672 275 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 FAM60DP-201ENST00000524174 632 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MEIS3Q99687 HPRT1P3-201ENST00000539521 576 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 PDCD5P1-201ENST00000543528 309 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 AC093027.1-201ENST00000546698 429 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.57□□□□□ -1.84
MEIS3Q99687 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.57□□□□□ -1.84
MEIS3Q99687 AL359212.1-201ENST00000556608 614 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 HSPE1P3-201ENST00000559254 309 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 AC034268.2-201ENST00000571784 482 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 RPS3AP23-202ENST00000574601 686 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.57□□□□□ -1.84
MEIS3Q99687 MIR4795-201ENST00000584182 89 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.57□□□□□ -1.84
MEIS3Q99687 AL009028.1-201ENST00000604895 802 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 AL136363.1-201ENST00000605349 337 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 RNU6-156P-201ENST00000621869 107 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 AC000123.2-201ENST00000623124 461 ntBASIC3.57□□□□□ -1.84
MEIS3Q99687 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
MEIS3Q99687 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MEIS3Q99687 MTND5P19-201ENST00000424872 1794 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms