Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 TAF9P2-201ENST00000454958 515 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AL122001.1-201ENST00000457027 370 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 RNA5SP269-201ENST00000459032 137 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 RNU7-59P-201ENST00000459101 61 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 RPL31P60-201ENST00000478450 367 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.04□□□□□ -1.92
CDCA3Q99618 HSPE1P6-201ENST00000479457 291 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.04□□□□□ -1.92
CDCA3Q99618 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.04□□□□□ -1.92
CDCA3Q99618 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDCA3Q99618 AL359273.1-201ENST00000510918 627 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 RNU4-29P-201ENST00000515943 174 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 RNA5SP217-201ENST00000515959 91 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 RNU1-61P-201ENST00000516107 151 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.04□□□□□ -1.92
CDCA3Q99618 AP003181.2-201ENST00000528941 181 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.04□□□□□ -1.92
CDCA3Q99618 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.04□□□□□ -1.92
CDCA3Q99618 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CDCA3Q99618 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.04□□□□□ -1.92
CDCA3Q99618 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.04□□□□□ -1.92
CDCA3Q99618 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.04□□□□□ -1.92
CDCA3Q99618 AL391156.1-201ENST00000554965 554 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.04□□□□□ -1.92
CDCA3Q99618 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.04□□□□□ -1.92
CDCA3Q99618 AC055876.1-202ENST00000567053 138 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 MIR3146-201ENST00000580367 79 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.04□□□□□ -1.92
CDCA3Q99618 AC073544.2-201ENST00000601155 540 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC015871.2-201ENST00000603605 948 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AL358072.1-201ENST00000604156 575 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC121334.2-201ENST00000605387 271 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC108747.1-201ENST00000609508 535 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC138749.5-201ENST00000611461 208 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC245517.5-201ENST00000611529 162 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC090970.3-201ENST00000612566 866 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AL110115.1-201ENST00000614396 364 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 AC116165.2-201ENST00000616705 206 ntBASIC3.04□□□□□ -1.92
CDCA3Q99618 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.04□□□□□ -1.92
CDCA3Q99618 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CDCA3Q99618 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDCA3Q99618 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.04□□□□□ -1.92
CDCA3Q99618 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDCA3Q99618 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CDCA3Q99618 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDCA3Q99618 RNU1-39P-201ENST00000383897 165 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 SNORA36C-201ENST00000384289 132 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 AL109755.1-201ENST00000401791 649 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.03□□□□□ -1.92
CDCA3Q99618 AC008850.1-201ENST00000427546 362 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 TIMM9P1-201ENST00000436122 256 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 MTND4P32-201ENST00000437189 1237 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.03□□□□□ -1.92
CDCA3Q99618 RPS23P3-201ENST00000470993 430 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 TRBV12-1-201ENST00000479785 344 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 AL049874.1-201ENST00000489560 388 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDCA3Q99618 RNU6-840P-201ENST00000517275 65 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.03□□□□□ -1.92
CDCA3Q99618 FAM60DP-201ENST00000524174 632 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 AP001804.3-201ENST00000525146 880 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.03□□□□□ -1.92
CDCA3Q99618 MIR3118-1-201ENST00000581787 76 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 AF038458.1-201ENST00000588406 262 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 BNIP3P8-201ENST00000597863 560 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 KC877982.1-201ENST00000602313 470 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.03□□□□□ -1.92
CDCA3Q99618 AL359999.1-201ENST00000604513 294 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 AC093783.1-201ENST00000612976 329 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 AC025594.3-201ENST00000613068 790 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 AC004696.1-201ENST00000614345 607 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.03□□□□□ -1.92
CDCA3Q99618 AL136313.1-201ENST00000624804 202 ntBASIC3.03□□□□□ -1.92
CDCA3Q99618 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.03□□□□□ -1.92
CDCA3Q99618 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.03□□□□□ -1.92
CDCA3Q99618 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CDCA3Q99618 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CDCA3Q99618 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDCA3Q99618 RNU5A-8P-201ENST00000364102 114 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 RNU4-40P-201ENST00000364351 143 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 RNY4P16-201ENST00000364768 94 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 MIR34A-201ENST00000385130 110 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 MIR493-201ENST00000385254 89 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 SNORA40.3-201ENST00000390964 122 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 TXNP7-201ENST00000406296 293 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 U3.42-201ENST00000408746 214 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 RNU2-52P-201ENST00000410680 190 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 MRPL50P2-201ENST00000416821 482 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.02□□□□□ -1.93
CDCA3Q99618 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.02□□□□□ -1.93
CDCA3Q99618 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.02□□□□□ -1.93
CDCA3Q99618 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.02□□□□□ -1.93
CDCA3Q99618 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.02□□□□□ -1.93
CDCA3Q99618 AL360221.1-201ENST00000445989 335 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 AL513328.1-201ENST00000446460 224 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 ST13P20-201ENST00000447996 1065 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 RN7SL442P-201ENST00000473804 320 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 AC012181.1-201ENST00000479895 423 ntBASIC3.02□□□□□ -1.93
CDCA3Q99618 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDCA3Q99618 AC114797.1-201ENST00000514003 728 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms