Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC008083.2-201ENST00000546707 476 ntBASIC3.34□□□□□ -1.87
NOTCH4Q99466 AP001180.3-201ENST00000582221 145 ntBASIC3.34□□□□□ -1.87
NOTCH4Q99466 AL078596.1-201ENST00000624856 447 ntBASIC3.34□□□□□ -1.87
NOTCH4Q99466 AC017071.1-201ENST00000564407 2204 ntBASIC3.34□□□□□ -1.87
NOTCH4Q99466 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
NOTCH4Q99466 AC006020.1-201ENST00000420179 1854 ntBASIC3.34□□□□□ -1.87
NOTCH4Q99466 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.34□□□□□ -1.87
NOTCH4Q99466 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.34□□□□□ -1.87
NOTCH4Q99466 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
NOTCH4Q99466 Y_RNA.100-201ENST00000363141 102 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 RNU6-1097P-201ENST00000363586 107 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 Y_RNA.231-201ENST00000364358 102 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 SNORA63C-201ENST00000364578 129 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 RNY4P36-201ENST00000391116 96 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 RN7SKP222-201ENST00000410651 315 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 COTL1P1-201ENST00000422309 375 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.34□□□□□ -1.88
NOTCH4Q99466 RPS24P8-201ENST00000431490 402 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.34□□□□□ -1.88
NOTCH4Q99466 GTF2IP13-201ENST00000438487 386 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 BNIP3P2-201ENST00000441221 577 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.34□□□□□ -1.88
NOTCH4Q99466 AL590639.1-201ENST00000456484 337 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.88
NOTCH4Q99466 EIF4EP3-201ENST00000498782 656 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 PCBP2P3-201ENST00000509726 843 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.34□□□□□ -1.88
NOTCH4Q99466 AC022882.1-201ENST00000532142 501 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 AC022884.3-201ENST00000579571 248 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.34□□□□□ -1.88
NOTCH4Q99466 AC010525.2-201ENST00000590920 195 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 IGHV3-29-201ENST00000604817 344 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 AC121334.2-201ENST00000605387 271 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.34□□□□□ -1.88
NOTCH4Q99466 AC244517.12-201ENST00000623581 663 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.34□□□□□ -1.88
NOTCH4Q99466 AC100810.6-201ENST00000638068 285 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NOTCH4Q99466 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
NOTCH4Q99466 AC022031.1-201ENST00000585985 2593 ntBASIC3.34□□□□□ -1.88
NOTCH4Q99466 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NOTCH4Q99466 AL118496.1-201ENST00000440201 1812 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
NOTCH4Q99466 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
NOTCH4Q99466 RIOK3P1-201ENST00000418778 1528 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 NUP58P1-201ENST00000502546 1738 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.33□□□□□ -1.88
NOTCH4Q99466 RNU6-1309P-201ENST00000363305 108 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 RNU6-639P-201ENST00000384074 107 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.33□□□□□ -1.88
NOTCH4Q99466 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.33□□□□□ -1.88
NOTCH4Q99466 AC006028.1-201ENST00000438379 402 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 AC022431.1-201ENST00000450941 438 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.33□□□□□ -1.88
NOTCH4Q99466 AC027575.1-201ENST00000481064 460 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 AP001025.2-201ENST00000490908 477 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 RNA5SP401-201ENST00000515920 127 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 AC105029.1-201ENST00000520250 669 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 AF279873.1-201ENST00000523393 313 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 LARP7P3-201ENST00000579888 337 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.33□□□□□ -1.88
NOTCH4Q99466 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.33□□□□□ -1.88
NOTCH4Q99466 XIAPP1-201ENST00000603162 600 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 CTHRC1P1-201ENST00000605383 469 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 AC133104.2-201ENST00000615272 193 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 PLCE1P1-201ENST00000622094 305 ntBASIC3.33□□□□□ -1.88
NOTCH4Q99466 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
NOTCH4Q99466 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NOTCH4Q99466 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.33□□□□□ -1.88
NOTCH4Q99466 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NOTCH4Q99466 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NOTCH4Q99466 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
NOTCH4Q99466 Y_RNA.401-201ENST00000383965 117 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 RNU6-574P-201ENST00000384265 107 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 MIR92A2-201ENST00000385299 75 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 AL138885.1-201ENST00000405921 675 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 Y_RNA.618-201ENST00000410949 107 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 AC018630.2-202ENST00000422992 927 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.32□□□□□ -1.88
NOTCH4Q99466 RPS15AP9-201ENST00000439856 381 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.32□□□□□ -1.88
NOTCH4Q99466 CBWD4P-201ENST00000445695 655 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 RNU1-143P-201ENST00000516296 146 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 RNU6-264P-201ENST00000517134 104 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.32□□□□□ -1.88
NOTCH4Q99466 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.32□□□□□ -1.88
NOTCH4Q99466 HSPE1P3-201ENST00000559254 309 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.32□□□□□ -1.88
NOTCH4Q99466 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.32□□□□□ -1.88
NOTCH4Q99466 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.32□□□□□ -1.88
NOTCH4Q99466 VN1R84P-201ENST00000593697 235 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 U1.23-201ENST00000610293 146 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 AC104237.2-201ENST00000612456 443 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 AC093913.1-201ENST00000614178 329 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 RNU1-68P-201ENST00000615382 146 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 uc_338.11-201ENST00000619132 160 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 U1.39-201ENST00000621562 146 ntBASIC3.32□□□□□ -1.88
NOTCH4Q99466 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NOTCH4Q99466 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NOTCH4Q99466 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms