Protein–RNA interactions for Protein: Q96Q15

SMG1, Serine/threonine-protein kinase SMG1, humanhuman

Known RBP Predictions only

Length 3,661 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1Q96Q15 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.72□□□□□ -2.29
SMG1Q96Q15 ARPC3P2-201ENST00000457786 533 ntBASIC0.72□□□□□ -2.29
SMG1Q96Q15 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC0.72□□□□□ -2.29
SMG1Q96Q15 CYCSP26-201ENST00000534107 320 ntBASIC0.72□□□□□ -2.29
SMG1Q96Q15 HSPE1P20-201ENST00000538133 289 ntBASIC0.72□□□□□ -2.29
SMG1Q96Q15 MIR4698-201ENST00000577795 80 ntBASIC0.72□□□□□ -2.29
SMG1Q96Q15 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.72□□□□□ -2.29
SMG1Q96Q15 SNORA67.1-201ENST00000364749 141 ntBASIC0.72□□□□□ -2.29
SMG1Q96Q15 RPL21P24-201ENST00000413752 448 ntBASIC0.72□□□□□ -2.29
SMG1Q96Q15 MRPL42P6-201ENST00000486397 371 ntBASIC0.72□□□□□ -2.29
SMG1Q96Q15 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC0.72□□□□□ -2.29
SMG1Q96Q15 AC243829.6-201ENST00000612652 106 ntBASIC0.72□□□□□ -2.29
SMG1Q96Q15 MIR524-201ENST00000385242 87 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.71□□□□□ -2.3
SMG1Q96Q15 HMGN1P30-201ENST00000589286 268 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 AC140725.3-201ENST00000616193 880 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 AC091932.3-201ENST00000624223 323 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 AC007785.2-201ENST00000598627 1916 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 RNU2-40P-201ENST00000410833 196 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 RNU6-351P-201ENST00000516097 100 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 RN7SKP179-201ENST00000516126 217 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 AC023050.2-201ENST00000544968 387 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.71□□□□□ -2.3
SMG1Q96Q15 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SMG1Q96Q15 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.71□□□□□ -2.3
SMG1Q96Q15 RNU1-23P-201ENST00000363361 144 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 HMGB1P9-201ENST00000429856 646 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 NAP1L1P3-201ENST00000462291 880 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 RPL9P9-202ENST00000466501 579 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 MTCO1P47-201ENST00000523889 1271 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 MIR3122-201ENST00000577243 73 ntBASIC0.71□□□□□ -2.3
SMG1Q96Q15 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.7□□□□□ -2.3
SMG1Q96Q15 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 MTCO1P43-201ENST00000431831 488 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 USP12PX-201ENST00000432383 1057 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.7□□□□□ -2.3
SMG1Q96Q15 MIR4474-201ENST00000579189 78 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 MIR4514-201ENST00000581410 57 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 YWHAQP7-201ENST00000603536 658 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 AL050343.2-201ENST00000607338 280 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.7□□□□□ -2.3
SMG1Q96Q15 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SMG1Q96Q15 AC011155.1-201ENST00000316512 456 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.7□□□□□ -2.3
SMG1Q96Q15 AC104685.1-201ENST00000502445 371 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 SCARNA1-201ENST00000517138 166 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.7□□□□□ -2.3
SMG1Q96Q15 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.7□□□□□ -2.3
SMG1Q96Q15 AC010620.1-201ENST00000601088 1102 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 SSXP9-201ENST00000417503 292 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 AC083923.1-201ENST00000523708 376 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 CYP2C61P-201ENST00000604072 290 ntBASIC0.7□□□□□ -2.3
SMG1Q96Q15 Z99497.1-201ENST00000421282 135 ntBASIC0.69□□□□□ -2.3
SMG1Q96Q15 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC0.69□□□□□ -2.3
SMG1Q96Q15 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.69□□□□□ -2.3
SMG1Q96Q15 EIF4A1P12-201ENST00000551910 141 ntBASIC0.69□□□□□ -2.3
SMG1Q96Q15 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SMG1Q96Q15 AC068787.1-201ENST00000623908 691 ntBASIC0.69□□□□□ -2.3
SMG1Q96Q15 AC018437.1-201ENST00000492214 406 ntBASIC0.69□□□□□ -2.3
SMG1Q96Q15 MRPS17P9-201ENST00000511924 393 ntBASIC0.69□□□□□ -2.3
SMG1Q96Q15 RNA5SP492-201ENST00000411330 114 ntBASIC0.69□□□□□ -2.3
SMG1Q96Q15 HSPE1P24-201ENST00000450782 238 ntBASIC0.69□□□□□ -2.3
SMG1Q96Q15 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.69□□□□□ -2.3
SMG1Q96Q15 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.69□□□□□ -2.3
SMG1Q96Q15 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.69□□□□□ -2.3
SMG1Q96Q15 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC0.69□□□□□ -2.3
SMG1Q96Q15 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.69□□□□□ -2.3
SMG1Q96Q15 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.68□□□□□ -2.3
SMG1Q96Q15 MTCO3P46-201ENST00000425787 232 ntBASIC0.68□□□□□ -2.3
SMG1Q96Q15 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.68□□□□□ -2.3
SMG1Q96Q15 BTF3P12-201ENST00000519620 469 ntBASIC0.68□□□□□ -2.3
SMG1Q96Q15 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.68□□□□□ -2.3
SMG1Q96Q15 AC106028.5-201ENST00000610332 395 ntBASIC0.68□□□□□ -2.3
SMG1Q96Q15 Y_RNA.170-201ENST00000363746 110 ntBASIC0.68□□□□□ -2.3
SMG1Q96Q15 AL355497.1-201ENST00000406262 551 ntBASIC0.68□□□□□ -2.3
SMG1Q96Q15 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.68□□□□□ -2.3
SMG1Q96Q15 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.68□□□□□ -2.3
SMG1Q96Q15 AP003484.1-201ENST00000530974 250 ntBASIC0.68□□□□□ -2.3
SMG1Q96Q15 AC007792.1-201ENST00000623023 402 ntBASIC0.68□□□□□ -2.3
SMG1Q96Q15 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
SMG1Q96Q15 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SMG1Q96Q15 HSPE1P1-201ENST00000421494 318 ntBASIC0.68□□□□□ -2.3
SMG1Q96Q15 AL591704.2-201ENST00000421658 181 ntBASIC0.68□□□□□ -2.3
SMG1Q96Q15 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.68□□□□□ -2.3
SMG1Q96Q15 CASP1P1-201ENST00000526345 212 ntBASIC0.68□□□□□ -2.3
SMG1Q96Q15 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC0.68□□□□□ -2.3
SMG1Q96Q15 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.68□□□□□ -2.3
SMG1Q96Q15 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.67□□□□□ -2.3
SMG1Q96Q15 AC091965.2-201ENST00000512324 613 ntBASIC0.67□□□□□ -2.3
SMG1Q96Q15 RNU4-77P-201ENST00000516692 156 ntBASIC0.67□□□□□ -2.3
SMG1Q96Q15 SNORA31.25-201ENST00000517242 134 ntBASIC0.67□□□□□ -2.3
SMG1Q96Q15 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.67□□□□□ -2.3
SMG1Q96Q15 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC0.67□□□□□ -2.3
SMG1Q96Q15 AC020658.4-201ENST00000613987 684 ntBASIC0.67□□□□□ -2.3
SMG1Q96Q15 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.67□□□□□ -2.3
SMG1Q96Q15 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SMG1Q96Q15 LSM1P1-201ENST00000438629 273 ntBASIC0.67□□□□□ -2.3
SMG1Q96Q15 AL031601.2-202ENST00000622650 282 ntBASIC0.67□□□□□ -2.3
SMG1Q96Q15 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.67□□□□□ -2.3
SMG1Q96Q15 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms