Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 AL590664.1-201ENST00000448065 339 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 MTND4LP30-201ENST00000454092 297 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 AC025465.3-201ENST00000510570 311 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 RNA5SP249-201ENST00000516127 99 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 RNA5SP464-201ENST00000516251 108 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 Y_RNA.700-201ENST00000516806 100 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 RNU6-182P-201ENST00000516970 105 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 MIR3138-201ENST00000585238 82 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 RAC1P9-201ENST00000604990 392 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 AC130454.1-201ENST00000622948 401 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 MTND5P6-201ENST00000422338 1798 ntBASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CCDC85AQ96PX6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 ZNF72P-201ENST00000425869 1908 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 Z73965.1-201ENST00000623412 2297 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 Y_RNA.19-201ENST00000362462 99 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 SNORA51.11-201ENST00000384442 131 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 HSPE1P8-201ENST00000406997 288 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 AL356387.2-201ENST00000422272 243 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 AC004975.1-201ENST00000428733 208 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 PRDX3P3-201ENST00000447765 522 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 RPS3AP46-201ENST00000448352 682 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 NUTF2P7-201ENST00000453086 375 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 MTND1P19-201ENST00000511780 315 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 RNU6-406P-201ENST00000516470 107 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 RNU6-840P-201ENST00000517275 65 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 AC136624.4-201ENST00000573044 370 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 LRRC37A5P-203ENST00000580181 585 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 RPS29P30-201ENST00000600975 111 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 AL390123.1-201ENST00000603216 237 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 AC114781.5-201ENST00000615297 108 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 AC139769.1-204ENST00000472297 1931 ntBASIC5.68□□□□□ -1.5
CCDC85AQ96PX6 AL672167.1-203ENST00000641299 2975 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 LINC01109-201ENST00000603837 3081 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 SAR1AP2-201ENST00000392696 594 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 AL080315.1-201ENST00000406055 466 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 RPL21P91-201ENST00000429231 479 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 BTF3P6-201ENST00000448054 499 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 HMGB3P17-201ENST00000504195 649 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 Y_RNA.687-201ENST00000516558 91 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 CBX3P8-201ENST00000532412 525 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 MIR548AC-201ENST00000585049 88 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 AC006023.2-201ENST00000609916 167 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 AL159153.1-201ENST00000619688 317 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 AC137590.2-201ENST00000619709 240 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 SDR42E1P4-201ENST00000620894 481 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 THAP12P5-201ENST00000405864 2275 ntBASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
CCDC85AQ96PX6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 AC026951.1-201ENST00000559530 2459 ntBASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 ZFRP1-201ENST00000457579 2970 ntBASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 Y_RNA.64-201ENST00000362845 102 ntBASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 Y_RNA.785-201ENST00000384290 109 ntBASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 Y_RNA.477-201ENST00000384352 108 ntBASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 SNORD73A-201ENST00000386062 65 ntBASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 SNORA11-201ENST00000408789 128 ntBASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 AC007738.1-201ENST00000413892 348 ntBASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 UBE2D3P2-201ENST00000424409 445 ntBASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 FO393415.2-201ENST00000480085 343 ntBASIC5.66□□□□□ -1.5
CCDC85AQ96PX6 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms