Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RNA5SP25-201ENST00000410815 110 ntBASIC0.82□□□□□ -2.28
CFAP54Q96N23 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.82□□□□□ -2.28
CFAP54Q96N23 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.82□□□□□ -2.28
CFAP54Q96N23 HMGB1P24-202ENST00000615653 685 ntBASIC0.82□□□□□ -2.28
CFAP54Q96N23 MTND5P11-201ENST00000511037 1812 ntBASIC0.82□□□□□ -2.28
CFAP54Q96N23 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CFAP54Q96N23 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
CFAP54Q96N23 RNA5SP511-201ENST00000410487 115 ntBASIC0.82□□□□□ -2.28
CFAP54Q96N23 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.82□□□□□ -2.28
CFAP54Q96N23 AP001180.3-201ENST00000582221 145 ntBASIC0.82□□□□□ -2.28
CFAP54Q96N23 AC011155.1-201ENST00000316512 456 ntBASIC0.81□□□□□ -2.28
CFAP54Q96N23 RNU6-942P-201ENST00000363002 107 ntBASIC0.81□□□□□ -2.28
CFAP54Q96N23 UBE2FP3-201ENST00000436366 524 ntBASIC0.81□□□□□ -2.28
CFAP54Q96N23 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.81□□□□□ -2.28
CFAP54Q96N23 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.81□□□□□ -2.28
CFAP54Q96N23 HMGN1P10-201ENST00000474557 553 ntBASIC0.81□□□□□ -2.28
CFAP54Q96N23 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.81□□□□□ -2.28
CFAP54Q96N23 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
CFAP54Q96N23 AC092745.2-202ENST00000411880 369 ntBASIC0.81□□□□□ -2.28
CFAP54Q96N23 AL031663.1-201ENST00000437445 219 ntBASIC0.81□□□□□ -2.28
CFAP54Q96N23 MIR4698-201ENST00000577795 80 ntBASIC0.81□□□□□ -2.28
CFAP54Q96N23 MIR4653-201ENST00000585107 83 ntBASIC0.81□□□□□ -2.28
CFAP54Q96N23 MTRNR2L2-201ENST00000604882 87 ntBASIC0.81□□□□□ -2.28
CFAP54Q96N23 AC243829.6-201ENST00000612652 106 ntBASIC0.81□□□□□ -2.28
CFAP54Q96N23 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.81□□□□□ -2.28
CFAP54Q96N23 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.8□□□□□ -2.28
CFAP54Q96N23 AL022718.1-201ENST00000412004 84 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.8□□□□□ -2.28
CFAP54Q96N23 RPS29P28-201ENST00000446439 141 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 AL035407.2-201ENST00000454090 378 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 Y_RNA.170-201ENST00000363746 110 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 Y_RNA.457-201ENST00000384237 111 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 AC104692.1-201ENST00000472406 90 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 AC023141.11-201ENST00000508864 202 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.8□□□□□ -2.28
CFAP54Q96N23 AC010735.1-201ENST00000567305 1026 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 AP006248.3-201ENST00000623580 594 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 AL136520.1-201ENST00000600311 1322 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 AL500527.1-201ENST00000448532 255 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 MRPL42P6-201ENST00000486397 371 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.8□□□□□ -2.28
CFAP54Q96N23 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 CD24P2-201ENST00000565486 219 ntBASIC0.8□□□□□ -2.28
CFAP54Q96N23 OR4G2P-201ENST00000328113 903 ntBASIC0.79□□□□□ -2.28
CFAP54Q96N23 SNORA23-201ENST00000365128 182 ntBASIC0.79□□□□□ -2.28
CFAP54Q96N23 AC005908.1-201ENST00000468701 347 ntBASIC0.79□□□□□ -2.28
CFAP54Q96N23 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.79□□□□□ -2.28
CFAP54Q96N23 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.79□□□□□ -2.28
CFAP54Q96N23 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.79□□□□□ -2.28
CFAP54Q96N23 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.79□□□□□ -2.28
CFAP54Q96N23 RNU1-104P-201ENST00000517280 175 ntBASIC0.79□□□□□ -2.28
CFAP54Q96N23 YWHAQP7-201ENST00000603536 658 ntBASIC0.79□□□□□ -2.28
CFAP54Q96N23 AC022387.2-201ENST00000604050 448 ntBASIC0.79□□□□□ -2.28
CFAP54Q96N23 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CFAP54Q96N23 RPS20P15-201ENST00000412792 311 ntBASIC0.78□□□□□ -2.28
CFAP54Q96N23 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.78□□□□□ -2.28
CFAP54Q96N23 AL161651.1-201ENST00000440882 223 ntBASIC0.78□□□□□ -2.28
CFAP54Q96N23 AC009901.1-201ENST00000506703 541 ntBASIC0.78□□□□□ -2.28
CFAP54Q96N23 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.78□□□□□ -2.28
CFAP54Q96N23 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
CFAP54Q96N23 HMGN1P30-201ENST00000589286 268 ntBASIC0.78□□□□□ -2.28
CFAP54Q96N23 AL031601.2-202ENST00000622650 282 ntBASIC0.78□□□□□ -2.28
CFAP54Q96N23 RNA5SP499-201ENST00000363982 119 ntBASIC0.78□□□□□ -2.28
CFAP54Q96N23 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.78□□□□□ -2.28
CFAP54Q96N23 LSM1P1-201ENST00000438629 273 ntBASIC0.78□□□□□ -2.28
CFAP54Q96N23 SNORA48.11-201ENST00000517015 89 ntBASIC0.78□□□□□ -2.28
CFAP54Q96N23 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.78□□□□□ -2.28
CFAP54Q96N23 BTF3P12-201ENST00000519620 469 ntBASIC0.78□□□□□ -2.28
CFAP54Q96N23 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.78□□□□□ -2.28
CFAP54Q96N23 AL356057.2-201ENST00000403318 432 ntBASIC0.78□□□□□ -2.29
CFAP54Q96N23 AC004022.2-201ENST00000413824 193 ntBASIC0.78□□□□□ -2.29
CFAP54Q96N23 AC092447.6-201ENST00000414578 210 ntBASIC0.78□□□□□ -2.29
CFAP54Q96N23 SNORD97-201ENST00000459187 142 ntBASIC0.78□□□□□ -2.29
CFAP54Q96N23 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.29
CFAP54Q96N23 AC106028.5-201ENST00000610332 395 ntBASIC0.78□□□□□ -2.29
CFAP54Q96N23 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.78□□□□□ -2.29
CFAP54Q96N23 AC073592.7-201ENST00000623659 507 ntBASIC0.78□□□□□ -2.29
CFAP54Q96N23 RNA5SP347-201ENST00000362445 119 ntBASIC0.77□□□□□ -2.29
CFAP54Q96N23 MIR124-3-201ENST00000384866 87 ntBASIC0.77□□□□□ -2.29
CFAP54Q96N23 RNU6-955P-201ENST00000410497 104 ntBASIC0.77□□□□□ -2.29
CFAP54Q96N23 SDCBPP1-201ENST00000440192 890 ntBASIC0.77□□□□□ -2.29
CFAP54Q96N23 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.77□□□□□ -2.29
CFAP54Q96N23 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.77□□□□□ -2.29
CFAP54Q96N23 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.77□□□□□ -2.29
CFAP54Q96N23 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CFAP54Q96N23 U8.3-201ENST00000363321 132 ntBASIC0.77□□□□□ -2.29
CFAP54Q96N23 RNU6-30P-201ENST00000384561 107 ntBASIC0.77□□□□□ -2.29
CFAP54Q96N23 RPL23AP32-201ENST00000395315 459 ntBASIC0.77□□□□□ -2.29
CFAP54Q96N23 Y_RNA.610-201ENST00000410681 103 ntBASIC0.77□□□□□ -2.29
CFAP54Q96N23 USP12PX-201ENST00000432383 1057 ntBASIC0.77□□□□□ -2.29
CFAP54Q96N23 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.77□□□□□ -2.29
CFAP54Q96N23 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.77□□□□□ -2.29
CFAP54Q96N23 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.77□□□□□ -2.29
CFAP54Q96N23 AC093510.2-201ENST00000562820 896 ntBASIC0.77□□□□□ -2.29
CFAP54Q96N23 RNU2-70P-201ENST00000410718 179 ntBASIC0.76□□□□□ -2.29
CFAP54Q96N23 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC0.76□□□□□ -2.29
CFAP54Q96N23 RNU6-496P-201ENST00000516145 99 ntBASIC0.76□□□□□ -2.29
CFAP54Q96N23 CASP1P1-201ENST00000526345 212 ntBASIC0.76□□□□□ -2.29
CFAP54Q96N23 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC0.76□□□□□ -2.29
CFAP54Q96N23 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms