Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC135721.1-201ENST00000497954 479 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC113155.1-201ENST00000511141 769 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AF131216.2-201ENST00000512316 564 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 TTC39CP1-201ENST00000512513 755 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC118465.1-201ENST00000513820 1271 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC091826.1-201ENST00000514065 313 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC116347.2-201ENST00000514912 523 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AP003122.4-201ENST00000530980 758 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC091489.2-201ENST00000566263 604 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 MIR3921-201ENST00000577308 85 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC008088.1-201ENST00000580993 280 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 MIR4444-1-201ENST00000581696 74 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AP001004.1-201ENST00000582468 324 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 MIR5194-201ENST00000582634 120 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 MIR4444-2-201ENST00000584390 74 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 RNU6-88P-201ENST00000606801 100 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC004067.1-201ENST00000608733 700 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AL162274.2-201ENST00000614406 332 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC090132.2-201ENST00000615881 347 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC027807.2-201ENST00000616099 408 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 AC004777.1-201ENST00000624317 287 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AL136313.1-201ENST00000624804 202 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 MIR3651-201ENST00000630427 90 ntBASIC2.05□□□□□ -2.08
LINC00477Q96M19 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC00477Q96M19 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.05□□□□□ -2.08
LINC00477Q96M19 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LINC00477Q96M19 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.05□□□□□ -2.08
LINC00477Q96M19 OR5J1P-201ENST00000313544 939 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LINC00477Q96M19 RNU1-100P-201ENST00000365255 165 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 RNU6-359P-201ENST00000365466 108 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC00477Q96M19 SNORD116-8-201ENST00000384365 95 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AL031577.2-201ENST00000404133 280 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 AL359704.1-201ENST00000411586 781 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 AL365203.2-201ENST00000423444 196 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 ZNF833P-201ENST00000424938 1494 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 AL358075.3-201ENST00000426289 226 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 ARPC3P1-201ENST00000437218 533 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 UBE2D3P4-201ENST00000441973 436 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AL022238.1-201ENST00000442557 355 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC118469.1-201ENST00000442943 488 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AP000936.2-201ENST00000447151 681 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 ST13P20-201ENST00000447996 1065 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC027673.1-201ENST00000456245 405 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 RPL31P41-201ENST00000477967 372 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC022447.3-201ENST00000506865 495 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 RNA5SP341-201ENST00000516261 117 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 RNA5SP82-201ENST00000516707 92 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 AP003181.2-201ENST00000528941 181 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 ACTR3BP3-201ENST00000565577 979 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC010546.1-201ENST00000569391 485 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.04□□□□□ -2.08
LINC00477Q96M19 NIFKP6-201ENST00000598115 845 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC012065.4-201ENST00000602445 679 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AC239868.4-201ENST00000608318 671 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 AP000254.1-201ENST00000609934 520 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 MIR203B-201ENST00000636080 86 ntBASIC2.04□□□□□ -2.08
LINC00477Q96M19 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LINC00477Q96M19 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
LINC00477Q96M19 OR4G2P-202ENST00000641004 1759 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LINC00477Q96M19 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LINC00477Q96M19 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.03□□□□□ -2.08
LINC00477Q96M19 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.03□□□□□ -2.08
LINC00477Q96M19 RNU6-461P-201ENST00000364195 107 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms