Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNU4-44P-201ENST00000363050 141 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 RNA5SP515-201ENST00000364570 118 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 RNU6-937P-201ENST00000384325 106 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 SNORA40-201ENST00000388090 126 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 ELOCP19-201ENST00000411919 318 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 PTGES3P4-201ENST00000426243 356 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 AL591043.1-201ENST00000432461 424 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 MTCO1P5-201ENST00000433573 344 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 BX679664.1-201ENST00000434429 253 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 FABP5P13-201ENST00000452144 328 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 AL137159.1-201ENST00000452808 512 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 AC079168.2-201ENST00000453977 416 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 SOD1P3-201ENST00000518682 454 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 MIR4293-201ENST00000584305 78 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 AL008718.3-201ENST00000610217 321 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 FP236240.3-201ENST00000623061 327 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM47Q96LD4 MAPK10-338ENST00000641647 3362 ntBASIC5.72□□□□□ -1.49
TRIM47Q96LD4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM47Q96LD4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
TRIM47Q96LD4 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AL590240.1-201ENST00000334118 313 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.82-201ENST00000363000 102 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.92-201ENST00000363043 102 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.235-201ENST00000364412 102 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 U3.13-201ENST00000364804 214 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.306-201ENST00000365015 102 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.308-201ENST00000365043 101 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.312-201ENST00000365089 102 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.322-201ENST00000365151 102 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 RNU6-946P-201ENST00000383878 107 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 RNU6-1056P-201ENST00000383996 107 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.504-201ENST00000384481 104 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 RNY4P18-201ENST00000391107 89 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 SNORA48.7-201ENST00000391302 135 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AL079342.1-201ENST00000401460 267 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AL445433.1-201ENST00000457507 257 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.650-201ENST00000459002 102 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 RPL23AP56-201ENST00000460778 453 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 HMGN2P13-201ENST00000476476 274 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.777-201ENST00000516982 102 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AC091144.1-201ENST00000519573 138 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 CYCSP26-201ENST00000534107 320 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AL133271.1-201ENST00000538229 291 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 MIR3160-1-201ENST00000577972 85 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 CPDP1-201ENST00000579660 283 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.771-201ENST00000598668 102 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AL158032.1-201ENST00000605401 106 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.789-201ENST00000622480 102 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AC243829.7-201ENST00000633081 225 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 AC010332.2-201ENST00000613083 1904 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM47Q96LD4 SMG1P4-204ENST00000523028 4131 ntBASIC5.71□□□□□ -1.5
TRIM47Q96LD4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 AC233981.2-201ENST00000611524 1614 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 AL445437.1-201ENST00000623157 3087 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 ZNF299P-201ENST00000406845 1804 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 SNORD73A-201ENST00000386062 65 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 SNORA77-201ENST00000408716 125 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 AC009238.2-201ENST00000431026 355 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 CBX1P4-201ENST00000439415 457 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 AC005094.1-201ENST00000440420 368 ntBASIC5.7□□□□□ -1.5
TRIM47Q96LD4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TRIM47Q96LD4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms