Protein–RNA interactions for Protein: Q96JN2

CCDC136, Coiled-coil domain-containing protein 136, humanhuman

Predictions only

Length 1,154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC136Q96JN2 RNU1-128P-201ENST00000516704 160 ntBASIC4.19□□□□□ -1.74
CCDC136Q96JN2 RNA5SP291-201ENST00000517222 105 ntBASIC4.19□□□□□ -1.74
CCDC136Q96JN2 DUXAP2-201ENST00000519198 589 ntBASIC4.19□□□□□ -1.74
CCDC136Q96JN2 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC136Q96JN2 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.19□□□□□ -1.74
CCDC136Q96JN2 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC136Q96JN2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.19□□□□□ -1.74
CCDC136Q96JN2 AL591516.1-201ENST00000611326 274 ntBASIC4.19□□□□□ -1.74
CCDC136Q96JN2 AC008498.1-201ENST00000613012 531 ntBASIC4.19□□□□□ -1.74
CCDC136Q96JN2 AC138932.5-201ENST00000617759 563 ntBASIC4.19□□□□□ -1.74
CCDC136Q96JN2 AC012442.3-202ENST00000636742 206 ntBASIC4.19□□□□□ -1.74
CCDC136Q96JN2 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC136Q96JN2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC4.19□□□□□ -1.74
CCDC136Q96JN2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CCDC136Q96JN2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC136Q96JN2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC136Q96JN2 U8.9-201ENST00000365667 134 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.18□□□□□ -1.74
CCDC136Q96JN2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC136Q96JN2 ZNF90P2-204ENST00000419323 1075 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AC092047.1-201ENST00000424997 240 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AC137499.1-201ENST00000427602 88 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 ARPC3P1-201ENST00000437218 533 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AC093392.2-201ENST00000450682 337 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 RN7SL75P-201ENST00000461926 281 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.18□□□□□ -1.74
CCDC136Q96JN2 SNORA31.3-201ENST00000516029 96 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 RNU6-1282P-201ENST00000516735 96 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 RNA5SP290-201ENST00000517133 127 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 SNORA31.26-201ENST00000517250 137 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AC068135.2-201ENST00000569293 1028 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 GLUD1P4-201ENST00000590914 418 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AL670379.6-201ENST00000603753 252 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AC098826.3-201ENST00000603823 466 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AL670379.11-201ENST00000604059 253 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AC008162.1-201ENST00000604718 254 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AL670379.1-201ENST00000604752 252 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AL670379.5-201ENST00000605253 252 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AL670379.12-201ENST00000605291 253 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AL670379.8-201ENST00000605353 252 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AL670379.7-201ENST00000605823 252 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CCDC136Q96JN2 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AC093831.2-201ENST00000624393 3427 ntBASIC4.18□□□□□ -1.74
CCDC136Q96JN2 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 CR848007.1-201ENST00000442354 1699 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 HSPE1P11-201ENST00000339579 310 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 RNU6-1167P-201ENST00000363227 94 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 RNU6-288P-201ENST00000363690 104 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 RNU6-512P-201ENST00000364438 103 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 SNORA62.3-201ENST00000365110 153 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 RNU6-1035P-201ENST00000384477 107 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 PTMAP2-201ENST00000397627 327 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 DEFB108C-201ENST00000400154 252 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 OR2AS1P-201ENST00000427827 319 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AC244505.4-201ENST00000434905 287 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 HMGB3P12-201ENST00000438745 556 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 SSXP5-201ENST00000443473 287 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AC025518.1-201ENST00000479856 347 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AL160314.1-201ENST00000490836 438 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 HIGD1AP1-201ENST00000550979 275 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 HMGB1P6-201ENST00000569046 646 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AC136601.2-201ENST00000604356 474 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AP002360.4-201ENST00000606980 481 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AL161734.1-201ENST00000609720 557 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 MIR7851-201ENST00000610611 160 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 AC073308.1-201ENST00000623696 305 ntBASIC4.17□□□□□ -1.74
CCDC136Q96JN2 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCDC136Q96JN2 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCDC136Q96JN2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCDC136Q96JN2 UBE2L2-201ENST00000254302 429 ntBASIC4.16□□□□□ -1.74
CCDC136Q96JN2 RNA5SP139-201ENST00000364340 117 ntBASIC4.16□□□□□ -1.74
CCDC136Q96JN2 RNU6-169P-201ENST00000365336 107 ntBASIC4.16□□□□□ -1.74
CCDC136Q96JN2 SNORA5A-201ENST00000384111 134 ntBASIC4.16□□□□□ -1.74
CCDC136Q96JN2 SNORA26.7-201ENST00000391288 122 ntBASIC4.16□□□□□ -1.74
CCDC136Q96JN2 AL031121.1-201ENST00000406553 254 ntBASIC4.16□□□□□ -1.74
CCDC136Q96JN2 CDK8P2-201ENST00000415020 547 ntBASIC4.16□□□□□ -1.74
CCDC136Q96JN2 AC099548.1-201ENST00000421443 426 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms