Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AP001960.1-201ENST00000506494 658 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 AC112198.4-201ENST00000515450 351 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 PRELID3BP4-201ENST00000515476 571 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 MTCO1P47-201ENST00000523889 1271 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.79□□□□□ -2.28
SPG11Q96JI7 AL442644.1-201ENST00000454390 3105 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
SPG11Q96JI7 MIR124-3-201ENST00000384866 87 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 Y_RNA.610-201ENST00000410681 103 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 RNU2-70P-201ENST00000410718 179 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 RPL31P63-201ENST00000422565 375 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.79□□□□□ -2.28
SPG11Q96JI7 OR6K5P-201ENST00000447050 945 ntBASIC0.79□□□□□ -2.28
SPG11Q96JI7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.79□□□□□ -2.28
SPG11Q96JI7 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC0.79□□□□□ -2.28
SPG11Q96JI7 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SPG11Q96JI7 Y_RNA.170-201ENST00000363746 110 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 AP000567.1-201ENST00000406413 156 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 RNA5SP511-201ENST00000410487 115 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 AL031663.1-201ENST00000437445 219 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.78□□□□□ -2.28
SPG11Q96JI7 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.78□□□□□ -2.28
SPG11Q96JI7 AL161722.3-201ENST00000605789 2983 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 RNU1-62P-201ENST00000362599 164 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 OR6C66P-201ENST00000414917 930 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.78□□□□□ -2.28
SPG11Q96JI7 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC0.78□□□□□ -2.28
SPG11Q96JI7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.78□□□□□ -2.28
SPG11Q96JI7 AL121871.1-201ENST00000443413 436 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 AC104308.1-201ENST00000454621 333 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 SNORD108-201ENST00000459332 71 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 MRPL42P6-201ENST00000486397 371 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.78□□□□□ -2.28
SPG11Q96JI7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.78□□□□□ -2.28
SPG11Q96JI7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.78□□□□□ -2.28
SPG11Q96JI7 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.78□□□□□ -2.28
SPG11Q96JI7 AC005786.1-201ENST00000588553 154 ntBASIC0.78□□□□□ -2.28
SPG11Q96JI7 ZNF37BP-203ENST00000452306 1352 ntBASIC0.78□□□□□ -2.29
SPG11Q96JI7 RNA5SP368-201ENST00000364298 116 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.77□□□□□ -2.29
SPG11Q96JI7 SNORD56-201ENST00000413522 71 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 MTND6P13-201ENST00000443510 523 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.77□□□□□ -2.29
SPG11Q96JI7 HMGN1P10-201ENST00000474557 553 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.77□□□□□ -2.29
SPG11Q96JI7 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC0.77□□□□□ -2.29
SPG11Q96JI7 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC0.77□□□□□ -2.29
SPG11Q96JI7 RN7SKP179-201ENST00000516126 217 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC0.77□□□□□ -2.29
SPG11Q96JI7 CBX3P7-201ENST00000532876 502 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 AC087465.1-201ENST00000560574 245 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 MIR4716-201ENST00000579628 84 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.77□□□□□ -2.29
SPG11Q96JI7 AC068620.4-201ENST00000636730 1182 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
SPG11Q96JI7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
SPG11Q96JI7 NACAP2-201ENST00000318548 624 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.77□□□□□ -2.29
SPG11Q96JI7 RNU6-39P-201ENST00000384344 107 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 RPS20P15-201ENST00000412792 311 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 AC060773.1-201ENST00000421698 310 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 UBE2FP3-201ENST00000436366 524 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 SDCBPP1-201ENST00000440192 890 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 HMGN2P10-201ENST00000448085 265 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 RNU6-1334P-201ENST00000516032 105 ntBASIC0.77□□□□□ -2.29
SPG11Q96JI7 RNU6-1263P-201ENST00000384601 106 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 RPL5P19-201ENST00000404228 893 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 RNA5SP193-201ENST00000410353 107 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 RPS6P14-201ENST00000425165 719 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.76□□□□□ -2.29
SPG11Q96JI7 AC096751.1-202ENST00000502691 1067 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.76□□□□□ -2.29
SPG11Q96JI7 AC009901.1-201ENST00000506703 541 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 AC083923.1-201ENST00000523708 376 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.76□□□□□ -2.29
SPG11Q96JI7 AC008269.2-201ENST00000561915 1105 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 MIR4474-201ENST00000579189 78 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 AL078605.1-201ENST00000603529 500 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 Pinc.1-201ENST00000616452 154 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 AL136520.1-201ENST00000600311 1322 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 RNU6-16P-201ENST00000384385 107 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 RPL21P24-201ENST00000413752 448 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 PTENP1-201ENST00000447117 1215 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 RPS20P10-201ENST00000451209 253 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.76□□□□□ -2.29
SPG11Q96JI7 AC018437.1-201ENST00000492214 406 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.76□□□□□ -2.29
SPG11Q96JI7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.76□□□□□ -2.29
SPG11Q96JI7 AC022387.2-201ENST00000604050 448 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 AC243829.6-201ENST00000612652 106 ntBASIC0.76□□□□□ -2.29
SPG11Q96JI7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SPG11Q96JI7 Y_RNA.25-201ENST00000362528 102 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 Y_RNA.572-201ENST00000384757 98 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.75□□□□□ -2.29
SPG11Q96JI7 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.75□□□□□ -2.29
SPG11Q96JI7 RPL7P31-201ENST00000450192 724 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 RPL31P58-201ENST00000469001 379 ntBASIC0.75□□□□□ -2.29
SPG11Q96JI7 TRBVB-201ENST00000477100 408 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms