Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 MIR3167-201ENST00000579623 85 ntBASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 AP001330.4-201ENST00000604350 154 ntBASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 AL022154.1-201ENST00000604698 785 ntBASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 AL034408.1-202ENST00000636088 415 ntBASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 AC009093.8-201ENST00000641769 292 ntBASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC47A1Q96FL8 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 RNA5SP124-201ENST00000362739 110 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 U3.6-201ENST00000363622 211 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 RNA5SP387-201ENST00000364226 106 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 SNORA70.4-201ENST00000365509 134 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 SNORA26.7-201ENST00000391288 122 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AL136372.1-201ENST00000403060 228 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 RAB9AP3-201ENST00000412737 573 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 SNRPEP4-201ENST00000435815 279 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AL451074.3-201ENST00000437709 472 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 RPL26P6-201ENST00000440913 438 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 RAB9AP1-201ENST00000449393 573 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 PRSS3P4-201ENST00000453323 162 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AL049714.1-201ENST00000466686 347 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AC104472.2-201ENST00000469035 601 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 RPL9P6-201ENST00000492764 598 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 FCF1P8-201ENST00000510322 597 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 RNU6-1220P-201ENST00000517126 108 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 SNORA31.22-201ENST00000517204 135 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 RNU6-840P-201ENST00000517275 65 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AC011979.2-201ENST00000527568 352 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AC007536.1-201ENST00000533382 349 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AC123904.3-201ENST00000547218 814 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 MIR4293-201ENST00000584305 78 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AF038458.1-201ENST00000588406 262 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 uc_338.1-201ENST00000612113 180 ntBASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.1□□□□□ -1.91
SLC47A1Q96FL8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 Y_RNA.6-201ENST00000362350 114 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 SNORA63.1-201ENST00000362493 131 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 RNU6-282P-201ENST00000365357 103 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 RPS3AP44-201ENST00000425466 790 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 FCF1P1-201ENST00000432690 571 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC073063.1-201ENST00000434352 607 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 RPL21P2-201ENST00000440049 481 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC016696.1-201ENST00000446949 318 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 RBMY2UP-201ENST00000453474 324 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AL590639.1-201ENST00000456484 337 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC010493.1-201ENST00000513479 292 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC026403.1-201ENST00000518938 295 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC005476.1-201ENST00000554427 397 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC025165.5-201ENST00000602802 578 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AL136363.1-201ENST00000605349 337 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC103710.2-201ENST00000609912 942 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AL591516.1-201ENST00000611326 274 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AL355810.1-201ENST00000614629 552 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AL158209.2-201ENST00000619266 216 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC073534.2-201ENST00000620377 381 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC006111.3-201ENST00000622137 383 ntBASIC3.09□□□□□ -1.91
SLC47A1Q96FL8 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms