Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RTP4Q96DX8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
RTP4Q96DX8 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTP4Q96DX8 MTND4P12-201ENST00000498999 1377 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTP4Q96DX8 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 OR1S2-201ENST00000302592 978 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 RNU5E-8P-201ENST00000363502 116 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 RNY3P3-201ENST00000363816 102 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 RNU6-1322P-201ENST00000364309 107 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 U3.11-201ENST00000364476 212 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTP4Q96DX8 RNU6-74P-201ENST00000384235 107 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 RNA5SP120-201ENST00000410900 112 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 RNU4-78P-201ENST00000410940 126 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 RNU2-41P-201ENST00000410991 178 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 OR9R1P-201ENST00000412200 877 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC092447.6-201ENST00000414578 210 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 MTCO3P12-201ENST00000416718 547 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 RPL21P111-201ENST00000418453 477 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 ZNF90P2-204ENST00000419323 1075 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 USP9YP7-201ENST00000436723 430 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 HMGB3P8-201ENST00000449709 577 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 USP9YP32-201ENST00000452432 430 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 CACYBPP2-201ENST00000453625 678 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 snoU13.3-201ENST00000459441 104 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 HMGB1P25-201ENST00000468402 607 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC083798.1-201ENST00000472671 131 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC233702.1-201ENST00000482905 502 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 RPL23AP41-201ENST00000484754 458 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 RPL39P36-201ENST00000490784 156 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC114786.4-201ENST00000508771 728 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC046134.1-201ENST00000514454 666 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 RN7SKP289-201ENST00000517244 295 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 AL133271.1-201ENST00000538229 291 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 AL359212.1-201ENST00000556608 614 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 FGF7P1-201ENST00000582820 288 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 AL117336.2-201ENST00000602435 335 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 uc_338.12-201ENST00000616344 181 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC002550.2-201ENST00000621246 394 ntBASIC3.38□□□□□ -1.87
RTP4Q96DX8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RTP4Q96DX8 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTP4Q96DX8 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTP4Q96DX8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RTP4Q96DX8 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RTP4Q96DX8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTP4Q96DX8 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RTP4Q96DX8 AL138713.1-201ENST00000624026 2130 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTP4Q96DX8 CBX3P1-201ENST00000325243 554 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 RPL7P26-201ENST00000333817 754 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RTP4Q96DX8 Y_RNA.22-201ENST00000362492 102 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 RNU6-1120P-201ENST00000362988 108 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 SNORD56.2-201ENST00000363242 71 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 RNU6-108P-201ENST00000365558 107 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RTP4Q96DX8 SNORA69-201ENST00000383895 132 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 SNORD51-201ENST00000384320 80 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 RNU6-1068P-201ENST00000410958 103 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.37□□□□□ -1.87
RTP4Q96DX8 MRPL50P2-201ENST00000416821 482 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.37□□□□□ -1.87
RTP4Q96DX8 AC005326.1-201ENST00000429197 123 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 GPR143P-201ENST00000434155 205 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 UBE2V1P13-201ENST00000436983 439 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RTP4Q96DX8 CST9LP2-201ENST00000437612 320 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.37□□□□□ -1.87
RTP4Q96DX8 CYCSP32-201ENST00000440548 321 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 AC016691.1-201ENST00000441321 413 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 AC125238.1-201ENST00000448842 249 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.37□□□□□ -1.87
RTP4Q96DX8 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.37□□□□□ -1.87
RTP4Q96DX8 MTCO2P29-201ENST00000465212 189 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 RN7SL807P-201ENST00000470923 297 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RTP4Q96DX8 AP000852.1-201ENST00000472460 573 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 S100A11P1-201ENST00000477525 312 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.37□□□□□ -1.87
RTP4Q96DX8 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.37□□□□□ -1.87
RTP4Q96DX8 AC114797.1-201ENST00000514003 728 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 RNA5SP401-201ENST00000515920 127 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 RNU6-798P-201ENST00000516912 103 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 RN7SKP57-201ENST00000517248 293 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 AP003072.2-201ENST00000527756 676 ntBASIC3.37□□□□□ -1.87
RTP4Q96DX8 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.37□□□□□ -1.87
RTP4Q96DX8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms