Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC010301.1-201ENST00000473936 355 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 AC067942.3-201ENST00000512025 362 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 RNU6-1308P-201ENST00000516817 103 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 SNORA31.20-201ENST00000517111 133 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
TTC28Q96AY4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.04□□□□□ -2.24
TTC28Q96AY4 OR6C7P-201ENST00000547875 934 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 NOP56P3-201ENST00000549457 385 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 MTCO1P40-201ENST00000574371 625 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 MIR5589-201ENST00000579442 60 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 SNHG22-203ENST00000617833 660 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 DUXAP9-208ENST00000622815 614 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 AC245060.5-201ENST00000610778 3293 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.04□□□□□ -2.24
TTC28Q96AY4 RNU6-222P-201ENST00000362438 107 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 RNA5SP391-201ENST00000363456 119 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 RNU6-418P-201ENST00000384035 107 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 RPS23P3-201ENST00000470993 430 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 MTCYBP37-201ENST00000510642 1133 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC1.04□□□□□ -2.24
TTC28Q96AY4 AL163153.1-201ENST00000554223 283 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 AC090616.5-202ENST00000582111 297 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 AL390240.1-201ENST00000612950 384 ntBASIC1.04□□□□□ -2.24
TTC28Q96AY4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.04□□□□□ -2.24
TTC28Q96AY4 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC1.04□□□□□ -2.24
TTC28Q96AY4 AP001350.1-201ENST00000601906 1524 ntBASIC1.03□□□□□ -2.24
TTC28Q96AY4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
TTC28Q96AY4 AC138915.1-201ENST00000565427 1685 ntBASIC1.03□□□□□ -2.24
TTC28Q96AY4 MIR409-201ENST00000362237 79 ntBASIC1.03□□□□□ -2.24
TTC28Q96AY4 RNU6-30P-201ENST00000384561 107 ntBASIC1.03□□□□□ -2.24
TTC28Q96AY4 RNU2-21P-201ENST00000410368 188 ntBASIC1.03□□□□□ -2.24
TTC28Q96AY4 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.03□□□□□ -2.24
TTC28Q96AY4 MTCO1P53-201ENST00000441633 699 ntBASIC1.03□□□□□ -2.24
TTC28Q96AY4 OR51B8P-201ENST00000449892 769 ntBASIC1.03□□□□□ -2.24
TTC28Q96AY4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.03□□□□□ -2.24
TTC28Q96AY4 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.03□□□□□ -2.24
TTC28Q96AY4 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.03□□□□□ -2.24
TTC28Q96AY4 AC104806.1-201ENST00000508720 308 ntBASIC1.03□□□□□ -2.24
TTC28Q96AY4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.03□□□□□ -2.24
TTC28Q96AY4 AC004923.2-201ENST00000529649 369 ntBASIC1.03□□□□□ -2.24
TTC28Q96AY4 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.03□□□□□ -2.24
TTC28Q96AY4 COX6CP3-201ENST00000580869 223 ntBASIC1.03□□□□□ -2.24
TTC28Q96AY4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.03□□□□□ -2.24
TTC28Q96AY4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC1.03□□□□□ -2.24
TTC28Q96AY4 FAM157B-203ENST00000639350 358 ntBASIC1.03□□□□□ -2.24
TTC28Q96AY4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
TTC28Q96AY4 AC080100.1-201ENST00000624239 5356 ntBASIC1.03□□□□□ -2.25
TTC28Q96AY4 RNU6-1293P-201ENST00000384077 107 ntBASIC1.03□□□□□ -2.25
TTC28Q96AY4 Y_RNA.571-201ENST00000384753 98 ntBASIC1.03□□□□□ -2.25
TTC28Q96AY4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.03□□□□□ -2.25
TTC28Q96AY4 RNU6-1073P-201ENST00000517182 106 ntBASIC1.03□□□□□ -2.25
TTC28Q96AY4 OSBPL9P3-201ENST00000534523 595 ntBASIC1.03□□□□□ -2.25
TTC28Q96AY4 ACTR3BP3-201ENST00000565577 979 ntBASIC1.03□□□□□ -2.25
TTC28Q96AY4 AL138880.2-201ENST00000616214 239 ntBASIC1.03□□□□□ -2.25
TTC28Q96AY4 RNU6-156P-201ENST00000621869 107 ntBASIC1.03□□□□□ -2.25
TTC28Q96AY4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.03□□□□□ -2.25
TTC28Q96AY4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TTC28Q96AY4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.02□□□□□ -2.25
TTC28Q96AY4 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
TTC28Q96AY4 MIR607-201ENST00000385241 96 ntBASIC1.02□□□□□ -2.25
TTC28Q96AY4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.02□□□□□ -2.25
TTC28Q96AY4 RPL21P66-201ENST00000426566 466 ntBASIC1.02□□□□□ -2.25
TTC28Q96AY4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.02□□□□□ -2.25
TTC28Q96AY4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.02□□□□□ -2.25
TTC28Q96AY4 HMGB1P22-201ENST00000505315 124 ntBASIC1.02□□□□□ -2.25
TTC28Q96AY4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.02□□□□□ -2.25
TTC28Q96AY4 AC133963.2-201ENST00000513686 578 ntBASIC1.02□□□□□ -2.25
TTC28Q96AY4 AC068338.1-201ENST00000565567 176 ntBASIC1.02□□□□□ -2.25
TTC28Q96AY4 MIR4446-201ENST00000578505 67 ntBASIC1.02□□□□□ -2.25
TTC28Q96AY4 AL590282.1-201ENST00000610379 1136 ntBASIC1.02□□□□□ -2.25
TTC28Q96AY4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.02□□□□□ -2.25
TTC28Q96AY4 CD24P4-201ENST00000382840 243 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 RNU6-629P-201ENST00000384061 103 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 RNA5SP492-201ENST00000411330 114 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 NUP35P2-201ENST00000416748 943 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 PSMA2P3-201ENST00000429685 675 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 AL512661.1-201ENST00000434586 1253 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 RPL31P20-201ENST00000449593 360 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 NCOR1P1-202ENST00000486162 291 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 SNORA48.9-201ENST00000516419 162 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 AC025918.2-201ENST00000558683 763 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 AC010615.3-201ENST00000597319 394 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 AC067863.3-201ENST00000624172 122 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TTC28Q96AY4 RNU6-185P-201ENST00000384421 107 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 MIR144-201ENST00000384886 86 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 AL138880.1-201ENST00000405824 642 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 MTND1P23-201ENST00000416931 372 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.01□□□□□ -2.25
TTC28Q96AY4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 XKRYP6-201ENST00000440468 1116 ntBASIC1.01□□□□□ -2.25
TTC28Q96AY4 XKRYP3-201ENST00000442113 1116 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms