Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
AP3S1Q92572 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.55□□□□□ -2.16
AP3S1Q92572 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
AP3S1Q92572 RNU1-72P-201ENST00000362976 153 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.55□□□□□ -2.16
AP3S1Q92572 VN1R36P-201ENST00000414936 291 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 FAM204CP-201ENST00000424489 642 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.55□□□□□ -2.16
AP3S1Q92572 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.55□□□□□ -2.16
AP3S1Q92572 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.55□□□□□ -2.16
AP3S1Q92572 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.55□□□□□ -2.16
AP3S1Q92572 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
AP3S1Q92572 AC025750.2-201ENST00000442609 450 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.55□□□□□ -2.16
AP3S1Q92572 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.55□□□□□ -2.16
AP3S1Q92572 USP9YP34-201ENST00000453983 808 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 AL672167.3-201ENST00000465951 960 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 RPS20P22-201ENST00000473700 357 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 RNA5SP112-201ENST00000515937 99 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 AC009063.1-201ENST00000563342 702 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.55□□□□□ -2.16
AP3S1Q92572 LARP7P3-201ENST00000579888 337 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 AC010928.2-201ENST00000588017 287 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 AL031274.2-201ENST00000599419 203 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 AP001429.1-201ENST00000602568 530 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 AC012468.1-201ENST00000604888 430 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 AC026790.2-201ENST00000606282 430 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 AC126118.1-201ENST00000607744 628 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.55□□□□□ -2.16
AP3S1Q92572 AP003485.2-201ENST00000623636 610 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.55□□□□□ -2.16
AP3S1Q92572 MIR4275-201ENST00000636486 87 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 MTND1P37-201ENST00000636562 264 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
AP3S1Q92572 MTCO1P4-201ENST00000520516 1409 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 AL359854.1-201ENST00000614203 1594 ntBASIC1.55□□□□□ -2.16
AP3S1Q92572 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
AP3S1Q92572 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.54□□□□□ -2.16
AP3S1Q92572 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
AP3S1Q92572 RNU6-748P-201ENST00000384648 107 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3S1Q92572 AL356057.1-202ENST00000402263 756 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
AP3S1Q92572 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3S1Q92572 AL445646.1-201ENST00000431784 216 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 MTND6P13-201ENST00000443510 523 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 HMGN1P5-201ENST00000448591 263 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3S1Q92572 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3S1Q92572 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.54□□□□□ -2.16
AP3S1Q92572 AC027575.1-201ENST00000481064 460 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 HMGB1P35-201ENST00000503360 598 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3S1Q92572 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3S1Q92572 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.54□□□□□ -2.16
AP3S1Q92572 AC022880.1-201ENST00000534017 973 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 LARP7P2-201ENST00000575306 125 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 DNAJC19P3-201ENST00000594491 331 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 AC068790.3-201ENST00000602988 553 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 MIR92B-201ENST00000607575 96 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 uc_338.14-201ENST00000613162 166 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 AL162233.1-201ENST00000620014 944 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 ZNF355P-201ENST00000427301 3216 ntBASIC1.54□□□□□ -2.16
AP3S1Q92572 RNA5SP289-201ENST00000362332 137 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
AP3S1Q92572 SNORA8-201ENST00000384574 139 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 RNU6-19P-201ENST00000384718 107 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 MIR128-1-201ENST00000384921 82 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 NDUFS5P4-201ENST00000412983 318 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.53□□□□□ -2.16
AP3S1Q92572 AL356320.1-201ENST00000429616 163 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 AC007182.2-201ENST00000489251 402 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 RPS27AP10-201ENST00000496103 208 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 AC104685.1-201ENST00000502445 371 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
AP3S1Q92572 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.53□□□□□ -2.16
AP3S1Q92572 RNU6-885P-201ENST00000516607 104 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 SNORD19.2-201ENST00000516978 73 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.53□□□□□ -2.16
AP3S1Q92572 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.53□□□□□ -2.16
AP3S1Q92572 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.53□□□□□ -2.16
AP3S1Q92572 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.53□□□□□ -2.16
AP3S1Q92572 SEPT7P9-203ENST00000604116 343 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 AL355802.4-201ENST00000607635 548 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 YWHAEP7-203ENST00000622054 312 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 AL159972.1-201ENST00000625150 448 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.53□□□□□ -2.16
AP3S1Q92572 MIR3199-2-201ENST00000636243 86 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 LINC02211-204ENST00000642024 1070 ntBASIC1.53□□□□□ -2.16
AP3S1Q92572 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.52□□□□□ -2.17
AP3S1Q92572 U3.12-201ENST00000364498 214 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 SNORA40.19-201ENST00000390846 128 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 MTCO2P31-201ENST00000402702 684 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 RNU4-53P-201ENST00000410828 140 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 OR9R1P-201ENST00000412200 877 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC1.52□□□□□ -2.17
AP3S1Q92572 AC092393.1-201ENST00000439625 742 ntBASIC1.52□□□□□ -2.17
AP3S1Q92572 MTND2P6-201ENST00000455337 1030 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms