Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTF1Q92541 AL138799.3-201ENST00000438968 350 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 AC234775.1-201ENST00000454247 670 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 AC007967.1-201ENST00000455422 1159 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTF1Q92541 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.54□□□□□ -1.68
RTF1Q92541 OR4R3P-201ENST00000525084 838 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 OR5B19P-201ENST00000531766 928 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.54□□□□□ -1.68
RTF1Q92541 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.54□□□□□ -1.68
RTF1Q92541 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.54□□□□□ -1.68
RTF1Q92541 MIR4293-201ENST00000584305 78 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.54□□□□□ -1.68
RTF1Q92541 LLPHP1-201ENST00000603571 367 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 AC010338.1-201ENST00000621823 717 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 FRG1KP-201ENST00000623592 341 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 AL136313.1-201ENST00000624804 202 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.54□□□□□ -1.68
RTF1Q92541 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.54□□□□□ -1.68
RTF1Q92541 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.54□□□□□ -1.68
RTF1Q92541 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTF1Q92541 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTF1Q92541 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
RTF1Q92541 CEP170P1-201ENST00000502249 4587 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 HSPA8P1-201ENST00000425843 1833 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AC004972.1-201ENST00000623934 2209 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTF1Q92541 AC073343.1-201ENST00000328239 651 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTF1Q92541 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTF1Q92541 RNU6-767P-201ENST00000384132 107 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 RNU4-65P-201ENST00000410473 140 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 RNU2-39P-201ENST00000410604 198 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 RNU4-78P-201ENST00000410940 126 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AC017079.2-201ENST00000416102 485 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC4.53□□□□□ -1.68
RTF1Q92541 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.53□□□□□ -1.68
RTF1Q92541 MTATP6P16-201ENST00000434543 526 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 RPL36AP6-201ENST00000435770 321 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AC093019.1-201ENST00000443135 252 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 CBWD4P-201ENST00000445695 655 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AC073415.1-201ENST00000449240 153 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.53□□□□□ -1.68
RTF1Q92541 SNORD97-201ENST00000459187 142 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AC006512.1-201ENST00000468816 291 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.53□□□□□ -1.68
RTF1Q92541 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
RTF1Q92541 AC116562.3-201ENST00000506136 177 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 RNU6-1095P-201ENST00000516148 108 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 HMGB1P41-201ENST00000520234 440 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AC100870.1-201ENST00000522035 505 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 FAM60DP-201ENST00000524174 632 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AC068587.5-201ENST00000528506 175 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.53□□□□□ -1.68
RTF1Q92541 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.53□□□□□ -1.68
RTF1Q92541 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.53□□□□□ -1.68
RTF1Q92541 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.53□□□□□ -1.68
RTF1Q92541 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.53□□□□□ -1.68
RTF1Q92541 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.53□□□□□ -1.68
RTF1Q92541 AL161756.2-201ENST00000604597 246 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 IGHV3-29-201ENST00000604817 344 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AL713922.2-201ENST00000619384 716 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTF1Q92541 AC073346.2-201ENST00000624724 2058 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RTF1Q92541 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
RTF1Q92541 AC073073.2-201ENST00000609827 2578 ntBASIC4.53□□□□□ -1.68
RTF1Q92541 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTF1Q92541 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.52□□□□□ -1.69
RTF1Q92541 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RTF1Q92541 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RTF1Q92541 NACAP2-201ENST00000318548 624 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 RNU5E-6P-201ENST00000365574 115 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RTF1Q92541 RN7SKP111-201ENST00000410349 271 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 BX323014.1-201ENST00000412876 237 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 SDCBPP3-201ENST00000419629 891 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 SRIP2-201ENST00000428470 166 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 RPS3AP12-201ENST00000443616 753 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.52□□□□□ -1.69
RTF1Q92541 AC092001.1-201ENST00000453012 261 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 RNU7-182P-201ENST00000459009 62 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 RPS27AP1-201ENST00000475545 471 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.52□□□□□ -1.69
RTF1Q92541 FCF1P8-201ENST00000510322 597 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.52□□□□□ -1.69
RTF1Q92541 ARL2BPP2-201ENST00000550907 489 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.52□□□□□ -1.69
RTF1Q92541 AL138976.2-201ENST00000563989 694 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.52□□□□□ -1.69
RTF1Q92541 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.52□□□□□ -1.69
RTF1Q92541 AC010525.2-201ENST00000590920 195 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.52□□□□□ -1.69
RTF1Q92541 AC006557.5-201ENST00000603126 811 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 AC087045.1-201ENST00000605856 382 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 MIR8058-201ENST00000615737 89 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 AL359697.1-201ENST00000624879 587 ntBASIC4.52□□□□□ -1.69
RTF1Q92541 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.52□□□□□ -1.69
RTF1Q92541 AC244205.2-202ENST00000635781 342 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms