Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RMST_6.1-201ENST00000611980 203 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 MIR6076-201ENST00000617521 113 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 SNRPEP2-201ENST00000397592 279 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC073264.1-201ENST00000411508 416 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 BEND7P1-201ENST00000422058 457 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 BNIP3P2-201ENST00000441221 577 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNU6-1073P-201ENST00000517182 106 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC090897.2-201ENST00000581715 130 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC078899.2-201ENST00000595282 212 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNU6-997P-201ENST00000384725 107 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 MIR144-201ENST00000384886 86 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 SLC9B1P2-201ENST00000398120 1184 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 MIR1303-201ENST00000408625 86 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 FNDC3CP-201ENST00000420795 1155 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 ARF4P4-201ENST00000439608 520 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 MTCO1P48-201ENST00000448024 1096 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC020699.1-201ENST00000505161 445 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC036111.3-201ENST00000526389 112 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AL161629.2-201ENST00000615347 275 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNA5SP62-201ENST00000363457 110 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNU6-1293P-201ENST00000384077 107 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 MIR1304-201ENST00000408243 91 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC007560.1-201ENST00000426912 237 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 MTCYBP45-201ENST00000435243 565 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AL691517.1-201ENST00000440833 1235 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 OR10R1P-201ENST00000441524 1141 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RAD1P2-201ENST00000446414 663 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNU6-1004P-201ENST00000516584 111 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC124947.2-202ENST00000552735 133 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 TRAV28-201ENST00000557548 323 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 CBX3P2-202ENST00000583365 535 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 AC106052.1-201ENST00000608029 497 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 RNU6-156P-201ENST00000621869 107 ntBASIC0.48□□□□□ -2.33
SYNE1Q8NF91 GDI2P1-201ENST00000429312 1336 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 RNU4-41P-201ENST00000364426 143 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 RNU6-339P-201ENST00000384310 107 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 Z86062.1-201ENST00000406773 777 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AIMP1P2-201ENST00000425294 312 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 NDUFS5P6-201ENST00000529136 295 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AL138976.2-201ENST00000563989 694 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 MIR3660-201ENST00000584845 100 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC004908.2-201ENST00000609090 574 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC087588.2-201ENST00000617667 426 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC017104.5-201ENST00000637647 639 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 SNORA7.1-201ENST00000363750 139 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 SNORA16.1-201ENST00000364597 132 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 MIR1323-201ENST00000408090 73 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC105252.1-201ENST00000503089 286 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 NDUFB4P2-201ENST00000509515 391 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC109464.2-201ENST00000510242 943 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 RNU6-202P-201ENST00000515998 96 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 SCARNA15.2-201ENST00000516409 127 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AL137100.2-201ENST00000555786 315 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 CYP3A137P-201ENST00000562436 69 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 MIR6788-201ENST00000618842 66 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AL159972.1-201ENST00000625150 448 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC080100.1-201ENST00000624239 5356 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AL513185.3-201ENST00000433335 1300 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 RNU6-234P-201ENST00000365229 104 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 HMGB1P17-201ENST00000403495 628 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 RNU2-43P-201ENST00000410306 190 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 MTCYBP34-201ENST00000439552 670 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC015724.1-201ENST00000478577 156 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC022447.3-201ENST00000506865 495 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 MTCYBP27-201ENST00000555160 670 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 MIR4723-201ENST00000585070 81 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC025165.5-201ENST00000602802 578 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AL161729.4-201ENST00000604650 476 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.47□□□□□ -2.33
SYNE1Q8NF91 RPL31P63-201ENST00000422565 375 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 CST2P1-201ENST00000425770 87 ntBASIC0.47□□□□□ -2.33
SYNE1Q8NF91 USP9YP10-201ENST00000454868 628 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms