Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 RNU6-188P-201ENST00000364207 107 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 RNU6-173P-201ENST00000364215 104 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 MTCYBP8-201ENST00000422855 651 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 USP9YP8-201ENST00000441913 500 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 RBMY2UP-201ENST00000453474 324 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AP000852.1-201ENST00000472460 573 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 RPL23AP55-201ENST00000498163 452 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 RPL38P4-201ENST00000502376 214 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 OR4H12P-201ENST00000556269 907 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 MIR4775-201ENST00000581168 75 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 MIR4672-201ENST00000583126 81 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AC006116.10-201ENST00000591836 581 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 SNRPGP15-201ENST00000600149 222 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AC006023.1-201ENST00000603944 259 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AC006077.1-201ENST00000604746 343 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AC004825.2-201ENST00000616634 455 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AC104260.1-201ENST00000616660 539 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AC233309.1-201ENST00000619522 751 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 AL353748.2-201ENST00000622148 471 ntBASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SMC1BQ8NDV3 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 AC004972.1-201ENST00000623934 2209 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 FTLP6-201ENST00000355274 422 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 RNU6-76P-201ENST00000384060 104 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 MIR513A2-201ENST00000385249 127 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 RNU6-1009P-201ENST00000390996 107 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 RNU2-29P-201ENST00000410423 189 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 RPL23AP89-201ENST00000439324 255 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 KC877373.1-201ENST00000479066 408 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 RPL21P13-201ENST00000488305 481 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 EIF4EP3-201ENST00000498782 656 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 MLLT10P2-201ENST00000506434 249 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 SNORA31.20-201ENST00000517111 133 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 ADI1P3-201ENST00000549509 470 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 MIR7851-201ENST00000610611 160 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 AC069234.5-201ENST00000611056 416 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 AC104985.2-201ENST00000620598 500 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 AC025034.2-201ENST00000623264 286 ntBASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SMC1BQ8NDV3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 RNU1-15P-201ENST00000353977 144 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 RNU6-797P-201ENST00000363101 109 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 RNU6-387P-201ENST00000411331 105 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 HLA-N-201ENST00000437516 135 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 PMCHL2-203ENST00000457791 237 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AC097462.2-201ENST00000504623 481 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 KLHL2P1-201ENST00000508691 521 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 ERHP1-201ENST00000523006 310 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AC011712.1-201ENST00000588959 234 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AC010525.2-201ENST00000590920 195 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AL162274.2-201ENST00000614406 332 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 SDR42E1P2-201ENST00000614861 481 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AL589994.2-201ENST00000621124 579 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 MIR7702-201ENST00000621931 59 ntBASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SMC1BQ8NDV3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms