Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 AC022447.3-201ENST00000506865 495 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AC022447.1-201ENST00000515358 464 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 SCARNA17.1-201ENST00000516211 143 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 SCARNA17.2-201ENST00000516334 143 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AC008507.2-201ENST00000588402 1176 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 OR10AB1P-201ENST00000609613 938 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 FTX_3.1-201ENST00000610451 147 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 SCARNA17.4-201ENST00000614296 143 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AC023158.2-201ENST00000614876 543 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 HMGB1P24-202ENST00000615653 685 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AC009268.2-201ENST00000621925 457 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 MIR6873-201ENST00000622788 63 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 CKAP2P1-201ENST00000555477 2049 ntBASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
ZIC4Q8N9L1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AL138713.1-201ENST00000624026 2130 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AL161781.1-201ENST00000354277 403 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 RNU2-49P-201ENST00000410666 184 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 HMGB3P2-201ENST00000411913 584 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AC023141.4-201ENST00000412031 328 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 MTND4P3-201ENST00000417829 541 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 SDR42E1P3-201ENST00000438345 502 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AL353705.4-201ENST00000449661 238 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 RPL18AP17-201ENST00000455326 198 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 RNU7-136P-201ENST00000458819 69 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 ANXA2P1-201ENST00000505539 926 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AC006499.2-201ENST00000513470 337 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 RNU5F-8P-201ENST00000515941 111 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 RNU1-41P-201ENST00000516161 162 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 RNU1-48P-201ENST00000516400 162 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 NRON-201ENST00000517270 370 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 OR6C7P-201ENST00000547875 934 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AC005951.2-201ENST00000576282 495 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 MTND4LP5-201ENST00000605152 292 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 MIR6840-201ENST00000611937 71 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AC024257.5-201ENST00000612739 531 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 AL356266.1-201ENST00000623311 483 ntBASIC1.87□□□□□ -2.11
ZIC4Q8N9L1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 RNU6-884P-201ENST00000363889 107 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 RNU6-301P-201ENST00000384277 107 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 Y_RNA.548-201ENST00000384656 105 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 RNU6-750P-201ENST00000390946 107 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AL513331.1-201ENST00000411908 397 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AC096649.2-201ENST00000416186 393 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 USP9YP21-201ENST00000420603 432 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 Z98742.2-201ENST00000431564 187 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 UBE2D3P1-201ENST00000436669 444 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 OSTCP8-201ENST00000445117 448 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 BX322784.1-201ENST00000455793 1077 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AC097493.1-201ENST00000463958 372 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 GTF2IP9-201ENST00000502460 301 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 BTF3P12-201ENST00000519620 469 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 IGKV3-31-201ENST00000523109 329 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AC136601.2-201ENST00000604356 474 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AC124016.2-201ENST00000610058 665 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AC010378.1-201ENST00000619270 362 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AC068057.2-201ENST00000624047 895 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 MIR203B-201ENST00000636080 86 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 AP000553.5-201ENST00000641933 54 ntBASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.86□□□□□ -2.11
ZIC4Q8N9L1 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 MTND4P27-201ENST00000450813 1354 ntBASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
ZIC4Q8N9L1 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms