Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 MIR200C-201ENST00000384980 68 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AL122016.1-201ENST00000403365 367 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 FAT1P1-201ENST00000406588 507 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 RPL23AP46-201ENST00000438548 490 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 RPS24P13-201ENST00000442520 397 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 RNU7-167P-201ENST00000459160 62 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 RPL30P5-201ENST00000494923 336 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AC146944.2-203ENST00000502493 354 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AC139495.1-202ENST00000513164 354 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 RNU1-61P-201ENST00000516107 151 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 RNA5SP143-201ENST00000516936 115 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AL352979.3-201ENST00000553515 247 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 MIR1273C-201ENST00000578669 77 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 BNIP3P25-201ENST00000596023 559 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AL354984.3-201ENST00000604803 325 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AC004805.2-201ENST00000605382 482 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AL110115.1-201ENST00000614396 364 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 AC022418.1-201ENST00000624118 445 ntBASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.32□□□□□ -1.72
SYNPOQ8N3V7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 FAM35BP-202ENST00000497389 3337 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 RNU6-1303P-201ENST00000364841 107 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 Y_RNA.414-201ENST00000384011 101 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 MT-TD-201ENST00000387419 68 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 EIF4E2P1-201ENST00000393781 255 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 AL356432.1-201ENST00000405809 419 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 USP9YP20-201ENST00000419224 558 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 HSPE1P1-201ENST00000421494 318 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 MTCO3P46-201ENST00000425787 232 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 AC005019.1-201ENST00000436455 431 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 AC008264.1-201ENST00000447612 367 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 AC012181.1-201ENST00000479895 423 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 MTND3P25-201ENST00000509243 135 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 MTND3P22-201ENST00000510932 243 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 RNA5SP360-201ENST00000516555 118 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 AC100770.1-201ENST00000532310 322 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 RAB11AP2-201ENST00000545905 639 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 RN7SL703P-201ENST00000578485 302 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 AL049641.1-201ENST00000441055 1948 ntBASIC4.31□□□□□ -1.72
SYNPOQ8N3V7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 NCAPGP1-201ENST00000505112 1814 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 SNORD113-7-201ENST00000363762 77 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 RNU6-371P-201ENST00000364283 108 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 Y_RNA.263-201ENST00000364659 114 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 RNU6-395P-201ENST00000365662 106 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 RNU6-1013P-201ENST00000384180 107 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 RNU6-140P-201ENST00000384566 108 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 Y_RNA.529-201ENST00000384586 119 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 AL591034.1-201ENST00000407447 340 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 RNU2-68P-201ENST00000410878 191 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 RNU2-41P-201ENST00000410991 178 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 RANP8-201ENST00000444720 713 ntBASIC4.3□□□□□ -1.72
SYNPOQ8N3V7 FABP5P15-201ENST00000453566 214 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms