Protein–RNA interactions for Protein: Q8N3U4

STAG2, Cohesin subunit SA-2, humanhuman

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG2Q8N3U4 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 AL672167.1-203ENST00000641299 2975 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 EOGT-210ENST00000615922 1931 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 Y_RNA.14-201ENST00000362415 103 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 Y_RNA.19-201ENST00000362462 99 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 RNU1-83P-201ENST00000363426 164 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 RNU4-50P-201ENST00000364361 141 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 Y_RNA.324-201ENST00000365165 102 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 MIR628-201ENST00000385229 95 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 AL138785.1-201ENST00000425821 331 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 AL451062.2-201ENST00000427515 271 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 RPL23AP2-201ENST00000471227 466 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 IGKV2D-23-201ENST00000518179 286 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 AC005951.2-201ENST00000576282 495 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 VN1R91P-201ENST00000594377 169 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 FP236240.3-201ENST00000623061 327 ntBASIC5.35□□□□□ -1.55
STAG2Q8N3U4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
STAG2Q8N3U4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 MTND5P6-201ENST00000422338 1798 ntBASIC5.34□□□□□ -1.55
STAG2Q8N3U4 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 AC032011.1-201ENST00000611703 1549 ntBASIC5.34□□□□□ -1.55
STAG2Q8N3U4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 RNU1-32P-201ENST00000363937 159 ntBASIC5.34□□□□□ -1.55
STAG2Q8N3U4 Y_RNA.276-201ENST00000364732 109 ntBASIC5.34□□□□□ -1.55
STAG2Q8N3U4 RNU6-882P-201ENST00000391025 103 ntBASIC5.34□□□□□ -1.55
STAG2Q8N3U4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 AC092423.1-201ENST00000430165 186 ntBASIC5.34□□□□□ -1.55
STAG2Q8N3U4 AL132765.1-201ENST00000434165 553 ntBASIC5.34□□□□□ -1.55
STAG2Q8N3U4 ISCUP1-201ENST00000454451 448 ntBASIC5.34□□□□□ -1.55
STAG2Q8N3U4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 RNU6-570P-201ENST00000517051 105 ntBASIC5.34□□□□□ -1.55
STAG2Q8N3U4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 RAC1P9-201ENST00000604990 392 ntBASIC5.34□□□□□ -1.55
STAG2Q8N3U4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.34□□□□□ -1.55
STAG2Q8N3U4 BMS1P21-201ENST00000634565 365 ntBASIC5.34□□□□□ -1.55
STAG2Q8N3U4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.34□□□□□ -1.56
STAG2Q8N3U4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
STAG2Q8N3U4 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
STAG2Q8N3U4 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
STAG2Q8N3U4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 ASNSP1-201ENST00000518311 1939 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 RNU6-770P-201ENST00000363929 105 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 AL513475.1-201ENST00000406602 315 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 RNU6-607P-201ENST00000411283 108 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 MTND5P15-201ENST00000434246 349 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 RPL23AP93-201ENST00000440847 484 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 AC006463.2-201ENST00000473326 348 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 AC113155.1-201ENST00000511141 769 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 RNU6-1023P-201ENST00000516137 106 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 BNIP3P5-201ENST00000562290 498 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 AC004584.2-201ENST00000570407 410 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 MIR4715-201ENST00000584117 79 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 Z99571.1-201ENST00000636677 394 ntBASIC5.33□□□□□ -1.56
STAG2Q8N3U4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
STAG2Q8N3U4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms