Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
BEST3Q8N1M1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.21□□□□□ -1.89
BEST3Q8N1M1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.21□□□□□ -1.89
BEST3Q8N1M1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
BEST3Q8N1M1 AC008568.2-201ENST00000623862 2313 ntBASIC3.21□□□□□ -1.89
BEST3Q8N1M1 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 Y_RNA.159-201ENST00000363674 87 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 RNU6-641P-201ENST00000384006 107 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 RNU6-701P-201ENST00000384059 107 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 SNORA9-201ENST00000384215 133 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 RNU6-74P-201ENST00000384235 107 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 MIR491-201ENST00000384877 84 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 U3.39-201ENST00000408569 239 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AL513331.1-201ENST00000411908 397 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 UBE2V1P10-201ENST00000414685 269 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 ZNF90P2-204ENST00000419323 1075 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 RPS15AP6-201ENST00000420703 385 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AL451054.2-201ENST00000420896 202 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 MTCO3P30-201ENST00000426425 670 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC006989.1-201ENST00000427212 131 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC005019.1-201ENST00000436455 431 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 RPL23AP20-201ENST00000447965 421 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 HMGN2P7-201ENST00000456186 273 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 HMGN2P16-201ENST00000456802 261 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 BX510359.1-201ENST00000456973 237 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC093899.1-201ENST00000457984 376 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC126389.1-201ENST00000477436 290 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC117522.1-201ENST00000509821 380 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 RNU2-27P-201ENST00000516185 142 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AP001804.3-201ENST00000525146 880 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC103710.3-201ENST00000608157 948 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC092794.1-201ENST00000612734 582 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC005609.4-201ENST00000625071 447 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.21□□□□□ -1.9
BEST3Q8N1M1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
BEST3Q8N1M1 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 OR4G2P-201ENST00000328113 903 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 RNA5SP42-201ENST00000364278 115 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 RNU6-283P-201ENST00000364788 107 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 RNU6-328P-201ENST00000390887 106 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 BX323014.1-201ENST00000412876 237 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 EIF1P1-201ENST00000421436 341 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AL590383.1-201ENST00000428602 75 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 MTATP6P30-201ENST00000443540 664 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 RPL9P32-201ENST00000464118 620 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 RN7SL594P-201ENST00000470590 287 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 RPL31P60-201ENST00000478450 367 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AP001086.1-201ENST00000494882 321 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AC026427.2-201ENST00000506228 536 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AC009646.1-201ENST00000510455 318 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 RNU1-61P-201ENST00000516107 151 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 MIR5047-201ENST00000579212 100 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 MIR5195-201ENST00000583555 115 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AL442067.2-201ENST00000614033 363 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 U6atac.1-201ENST00000616025 117 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AC091953.5-201ENST00000622919 233 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AC007998.5-201ENST00000622938 237 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 AL353746.1-201ENST00000566293 6881 ntBASIC3.2□□□□□ -1.9
BEST3Q8N1M1 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
BEST3Q8N1M1 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms