Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.58□□□□□ -2
CCDC65Q8IXS2 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 AC022447.3-201ENST00000506865 495 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 NRON-201ENST00000517270 370 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CCDC65Q8IXS2 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 AC009097.3-201ENST00000563557 1018 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 AC004987.4-201ENST00000603383 338 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 AL596327.1-201ENST00000603629 213 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 MIR6840-201ENST00000611937 71 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 AC009159.1-201ENST00000618386 642 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 AC025034.2-201ENST00000623264 286 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 OR5H6-203ENST00000642105 978 ntBASIC2.58□□□□□ -2
CCDC65Q8IXS2 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.58□□□□□ -2
CCDC65Q8IXS2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 SNORA23-201ENST00000365128 182 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC65Q8IXS2 RNU6-198P-201ENST00000384258 104 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 RNU6-1035P-201ENST00000384477 107 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 RNU4-72P-201ENST00000410754 173 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 SPA17P1-201ENST00000416656 452 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 AC092047.1-201ENST00000424997 240 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 RPS15AP28-201ENST00000435088 386 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 RSU1P2-202ENST00000437884 485 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 AL117351.1-201ENST00000438864 766 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 PGBD4P3-201ENST00000440731 581 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 IPO7P1-201ENST00000442031 636 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC65Q8IXS2 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 MTND1P9-201ENST00000453775 944 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 AL139109.1-201ENST00000455491 297 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 RPL7P18-201ENST00000478965 734 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 AC087276.1-201ENST00000529659 480 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 AC068135.2-201ENST00000569293 1028 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 AC010546.1-201ENST00000569391 485 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 MTND1P8-201ENST00000571424 950 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 ISCA1P3-201ENST00000577104 373 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 MIR5007-201ENST00000583098 95 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 SCARNA15.3-201ENST00000626315 122 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 SCARNA4.1-201ENST00000628597 123 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 AL049641.1-201ENST00000441055 1948 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 AC007785.2-201ENST00000598627 1916 ntBASIC2.57□□□□□ -2
CCDC65Q8IXS2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC65Q8IXS2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC65Q8IXS2 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.57□□□□□ -2
CCDC65Q8IXS2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC65Q8IXS2 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.57□□□□□ -2
CCDC65Q8IXS2 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 SNORA6-201ENST00000384033 151 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC65Q8IXS2 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 AL445669.1-201ENST00000426743 755 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 AC008850.1-201ENST00000427546 362 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 AL356867.1-201ENST00000429623 299 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 AC084290.1-201ENST00000434995 374 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 SNRPEP7-201ENST00000438350 220 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 IFNA11P-201ENST00000446352 526 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 AP000542.1-201ENST00000448473 371 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 AC023538.1-201ENST00000534576 736 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 AC087241.2-201ENST00000535801 324 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 AL133445.2-201ENST00000611191 527 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 AL137847.3-201ENST00000611521 109 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 AC013476.2-201ENST00000614456 459 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 AL136981.2-201ENST00000617319 734 ntBASIC2.56□□□□□ -2
CCDC65Q8IXS2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.56□□□□□ -2
CCDC65Q8IXS2 OR4G3P-201ENST00000633500 913 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms