Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MTND5P33-201ENST00000571250 1450 ntBASIC2.4□□□□□ -2.02
NUDCD3Q8IVD9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 RPL21P132-201ENST00000331267 462 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-223P-201ENST00000362830 107 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 AC104389.3-201ENST00000445629 235 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 DPPA3P1-201ENST00000448050 469 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 RPS15AP27-201ENST00000449183 343 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 RPL12P25-201ENST00000455592 494 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 RPL23AP45-201ENST00000476406 468 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 UBTFL10-201ENST00000528532 562 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 AC087465.1-201ENST00000560574 245 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 MTND1P8-201ENST00000571424 950 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 VN1R92P-201ENST00000598511 928 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 BNIP3P39-201ENST00000601077 554 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 MTND4LP5-201ENST00000605152 292 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-88P-201ENST00000606801 100 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 FTX_3.1-201ENST00000610451 147 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 AC011890.2-201ENST00000613393 294 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 U4.3-201ENST00000621047 82 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 AL356596.1-201ENST00000624230 379 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.4□□□□□ -2.03
NUDCD3Q8IVD9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-723P-201ENST00000383973 107 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-83P-201ENST00000384568 112 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 MIR27B-201ENST00000385129 97 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 U3.37-201ENST00000408528 213 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AL359704.1-201ENST00000411586 781 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AL358075.3-201ENST00000426289 226 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC008481.1-201ENST00000463278 396 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 RPS29P20-201ENST00000489592 171 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-390P-201ENST00000516259 103 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 COX6CP5-201ENST00000527162 228 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 PRELID2P1-201ENST00000552837 301 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AL133153.1-201ENST00000557756 303 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AL391001.1-201ENST00000602747 715 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC021171.1-201ENST00000603137 706 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC005000.2-201ENST00000605468 310 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC097468.3-201ENST00000607956 456 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC007349.4-201ENST00000608114 532 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC135507.2-201ENST00000612443 309 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 MIR6895-201ENST00000613497 78 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC005336.3-201ENST00000623833 2679 ntBASIC2.39□□□□□ -2.03
NUDCD3Q8IVD9 AC069528.2-201ENST00000624849 1991 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-859P-201ENST00000362728 107 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-433P-201ENST00000363216 104 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 SNORD114-30-201ENST00000364448 72 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-7-201ENST00000364784 107 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-8-201ENST00000365467 107 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 RNU6-157P-201ENST00000383957 107 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 MIR19A-201ENST00000384878 82 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 AL122016.1-201ENST00000403365 367 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 AF274854.1-201ENST00000413236 615 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 SDR42E1P3-201ENST00000438345 502 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 MTATP6P30-201ENST00000443540 664 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 FAM103A2P-201ENST00000444122 354 ntBASIC2.38□□□□□ -2.03
NUDCD3Q8IVD9 RPL23AP35-201ENST00000451906 501 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms