Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 RPL7P46-201ENST00000425129 740 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 AL117339.2-201ENST00000430475 180 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 AL160004.2-201ENST00000432935 350 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC105402.2-201ENST00000438503 358 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC005094.1-201ENST00000440420 368 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC104058.1-201ENST00000448028 297 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AL162151.2-201ENST00000448875 158 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AL451050.1-201ENST00000450126 415 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC004801.2-202ENST00000463559 283 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 SNORA25.10-201ENST00000515926 124 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 FAM60DP-201ENST00000524174 632 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC135001.1-201ENST00000544546 283 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 YPEL5P3-201ENST00000547227 352 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC091167.4-201ENST00000605079 184 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AC133104.2-201ENST00000615272 193 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 ZYXP1-201ENST00000617638 118 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 AL136313.1-201ENST00000624804 202 ntBASIC3.9□□□□□ -1.79
VRK3Q8IV63 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
VRK3Q8IV63 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VRK3Q8IV63 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
VRK3Q8IV63 TPTE2P4-201ENST00000258589 1605 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 IQCB2P-201ENST00000401788 1633 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 Y_RNA.47-201ENST00000362697 108 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 Y_RNA.557-201ENST00000384680 107 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 U3.29-201ENST00000391296 212 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 RNU6-387P-201ENST00000411331 105 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 RPL31P2-201ENST00000413849 377 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 RAC1P6-201ENST00000423911 575 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 MTCYBP10-201ENST00000424905 650 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC092017.2-201ENST00000427600 362 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC092013.1-201ENST00000438795 332 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 MTATP8P1-201ENST00000467115 207 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 HMGB1P30-201ENST00000492455 606 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC146944.2-203ENST00000502493 354 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC097473.1-201ENST00000508142 408 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC139495.1-202ENST00000513164 354 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 RNU6-64P-201ENST00000517119 105 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 RNA5SP179-201ENST00000517284 121 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 RANP9-201ENST00000519957 271 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 GNRHR2P1-201ENST00000555315 631 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC007224.1-201ENST00000564410 144 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC138761.3-201ENST00000579993 334 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC092747.3-201ENST00000603769 301 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 NUTF2P8-201ENST00000604593 363 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 AL669831.3-213ENST00000636676 183 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 AC090337.1-201ENST00000579651 2074 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 ZNF807-201ENST00000328088 1707 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 ZNF734P-201ENST00000419494 1534 ntBASIC3.89□□□□□ -1.79
VRK3Q8IV63 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
VRK3Q8IV63 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
VRK3Q8IV63 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 RNU6-702P-201ENST00000364982 107 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 Y_RNA.463-201ENST00000384271 102 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 RNU6-601P-201ENST00000384540 107 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 MIR1251-201ENST00000408552 70 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 RPL7P10-201ENST00000417407 739 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC011742.1-201ENST00000431448 434 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC083863.1-201ENST00000438811 231 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 MIR2053-201ENST00000459295 91 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 TRBV1-201ENST00000476502 284 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 RN7SL271P-201ENST00000487601 295 ntBASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.88□□□□□ -1.79
VRK3Q8IV63 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms