Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC018692.3-201ENST00000623929 123 ntBASIC3.23□□□□□ -1.89
PRPF39Q86UA1 AC091953.2-201ENST00000623979 160 ntBASIC3.23□□□□□ -1.89
PRPF39Q86UA1 SCARNA15.3-201ENST00000626315 122 ntBASIC3.23□□□□□ -1.89
PRPF39Q86UA1 SCARNA4.1-201ENST00000628597 123 ntBASIC3.23□□□□□ -1.89
PRPF39Q86UA1 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
PRPF39Q86UA1 MTND5P29-201ENST00000458676 1807 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 RNU6-884P-201ENST00000363889 107 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AL138885.1-201ENST00000405921 675 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 Y_RNA.608-201ENST00000410647 95 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 MTND2P18-201ENST00000419962 1030 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AL645937.1-202ENST00000421799 937 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AL356583.2-201ENST00000426536 280 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 GPM6BP2-201ENST00000432046 144 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 SNRPEP9-201ENST00000436794 238 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 MTND4P25-201ENST00000441039 533 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 NEFMP1-201ENST00000443423 1006 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 GPM6BP1-201ENST00000446387 144 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 COX6CP12-201ENST00000446748 202 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 RN7SL432P-201ENST00000484057 298 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC006445.1-201ENST00000491925 405 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 RPS27P26-201ENST00000494583 239 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AL391261.3-201ENST00000557194 520 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC106782.4-201ENST00000568264 210 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC098826.3-201ENST00000603823 466 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC112191.3-201ENST00000604371 277 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC004805.2-201ENST00000605382 482 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AL031775.1-201ENST00000607014 887 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 RNU6-87P-201ENST00000607561 108 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC107294.1-201ENST00000609524 467 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC034102.8-201ENST00000615146 484 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC104010.1-201ENST00000616889 150 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 AL079305.1-201ENST00000623159 3008 ntBASIC3.22□□□□□ -1.89
PRPF39Q86UA1 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.22□□□□□ -1.89
PRPF39Q86UA1 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 UBE2L2-201ENST00000254302 429 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 AF228730.1-201ENST00000397972 663 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 CETN4P-201ENST00000432407 469 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 RPS12P18-201ENST00000442381 270 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 ST13P20-201ENST00000447996 1065 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 CECR9-201ENST00000453421 199 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 RNU2-10P-201ENST00000516375 211 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 AP002404.1-201ENST00000532005 451 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 MIR3118-1-201ENST00000581787 76 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 HMGN2P15-201ENST00000585707 270 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 AL355877.2-201ENST00000603670 358 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 AC008498.1-201ENST00000613012 531 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 AC009878.1-201ENST00000621819 340 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 AC008669.1-201ENST00000565823 2178 ntBASIC3.21□□□□□ -1.9
PRPF39Q86UA1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
PRPF39Q86UA1 AC099654.7-201ENST00000635788 2127 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AL365361.1-201ENST00000566942 3481 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AC008264.2-201ENST00000610193 3731 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 RNU6-512P-201ENST00000364438 103 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 SNORA46-201ENST00000384762 135 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 MIR888-201ENST00000401186 77 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AC245054.2-201ENST00000415639 319 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.2□□□□□ -1.9
PRPF39Q86UA1 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.2□□□□□ -1.9
PRPF39Q86UA1 HMGN2P30-201ENST00000423237 256 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms