Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 RNU6-195P-201ENST00000411352 109 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 AC007899.1-201ENST00000412776 775 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AC092047.1-201ENST00000424997 240 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.14□□□□□ -1.91
LDB1Q86U70 PIGFP3-201ENST00000441918 722 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB1Q86U70 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB1Q86U70 KC877373.1-201ENST00000479066 408 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 AL160314.1-201ENST00000490836 438 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB1Q86U70 SNORA31.3-201ENST00000516029 96 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AP006587.4-201ENST00000526053 529 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB1Q86U70 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LDB1Q86U70 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AL163153.1-201ENST00000554223 283 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB1Q86U70 HMGB1P6-201ENST00000569046 646 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB1Q86U70 MIR3611-201ENST00000584484 83 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AC006566.1-201ENST00000608943 513 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 AL161734.1-201ENST00000609720 557 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 AC034102.8-201ENST00000615146 484 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 MIR7112-201ENST00000616126 65 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.14□□□□□ -1.91
LDB1Q86U70 AL137003.2-201ENST00000606924 2538 ntBASIC3.14□□□□□ -1.91
LDB1Q86U70 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
LDB1Q86U70 RNA5SP267-201ENST00000364893 126 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 RNU6-805P-201ENST00000365643 106 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 RPL32P35-201ENST00000415214 394 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.13□□□□□ -1.91
LDB1Q86U70 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.13□□□□□ -1.91
LDB1Q86U70 OR2AS1P-201ENST00000427827 319 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 HMGB1P27-201ENST00000431429 603 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 HMGB3P12-201ENST00000438745 556 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 BNIP3P2-201ENST00000441221 577 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 AC125238.1-201ENST00000448842 249 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.13□□□□□ -1.91
LDB1Q86U70 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.13□□□□□ -1.91
LDB1Q86U70 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.13□□□□□ -1.91
LDB1Q86U70 AC010265.1-201ENST00000513509 211 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
LDB1Q86U70 AC022616.3-201ENST00000523940 148 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.13□□□□□ -1.91
LDB1Q86U70 AC087883.1-201ENST00000551882 391 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.13□□□□□ -1.91
LDB1Q86U70 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.13□□□□□ -1.91
LDB1Q86U70 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.13□□□□□ -1.91
LDB1Q86U70 AL845331.3-202ENST00000562856 261 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 MIR3167-201ENST00000579623 85 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.13□□□□□ -1.91
LDB1Q86U70 BNIP3P22-201ENST00000593399 556 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.13□□□□□ -1.91
LDB1Q86U70 AC079089.3-201ENST00000603094 673 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 AC245014.2-201ENST00000603689 287 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 AL161729.4-201ENST00000604650 476 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 AC246785.4-201ENST00000605374 287 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 AC072046.2-201ENST00000618366 268 ntBASIC3.13□□□□□ -1.91
LDB1Q86U70 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.13□□□□□ -1.91
LDB1Q86U70 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.13□□□□□ -1.91
LDB1Q86U70 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LDB1Q86U70 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LDB1Q86U70 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
LDB1Q86U70 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
LDB1Q86U70 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LDB1Q86U70 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LDB1Q86U70 CR848007.1-201ENST00000442354 1699 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AC022336.2-201ENST00000568966 2538 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AC073343.1-201ENST00000328239 651 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 Y_RNA.359-201ENST00000365498 102 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 MTND3P17-201ENST00000416968 344 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 BX295541.1-201ENST00000417774 250 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 BTF3L4P3-201ENST00000418879 476 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AC012498.1-201ENST00000424037 437 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB1Q86U70 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.12□□□□□ -1.91
LDB1Q86U70 AC006946.1-201ENST00000429106 328 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 HIGD1AP11-201ENST00000438361 280 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 RPS24P1-201ENST00000438550 371 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB1Q86U70 NEFMP1-201ENST00000443423 1006 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB1Q86U70 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.12□□□□□ -1.91
LDB1Q86U70 RPL37P6-201ENST00000460682 294 ntBASIC3.12□□□□□ -1.91
LDB1Q86U70 RN7SL863P-201ENST00000462370 296 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms