Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 MIR3921-201ENST00000577308 85 ntBASIC0.62□□□□□ -2.31
LINC00643Q86TS7 MIR4310-201ENST00000582950 57 ntBASIC0.62□□□□□ -2.31
LINC00643Q86TS7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC0.62□□□□□ -2.31
LINC00643Q86TS7 AL022099.1-201ENST00000604551 712 ntBASIC0.62□□□□□ -2.31
LINC00643Q86TS7 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC0.62□□□□□ -2.31
LINC00643Q86TS7 AL589743.7-201ENST00000612637 233 ntBASIC0.62□□□□□ -2.31
LINC00643Q86TS7 AC099842.1-201ENST00000619919 596 ntBASIC0.62□□□□□ -2.31
LINC00643Q86TS7 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC0.62□□□□□ -2.31
LINC00643Q86TS7 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC0.62□□□□□ -2.31
LINC00643Q86TS7 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
LINC00643Q86TS7 METTL5-202ENST00000308099 629 ntTSL 3 BASIC0.61□□□□□ -2.31
LINC00643Q86TS7 RNA5SP515-201ENST00000364570 118 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 RNU6-7-201ENST00000364784 107 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 RNU6-8-201ENST00000365467 107 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 TAF9BP2-201ENST00000400856 499 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 RNU2-63P-201ENST00000410792 194 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AC007064.3-201ENST00000422608 359 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AC007742.1-201ENST00000425789 329 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.61□□□□□ -2.31
LINC00643Q86TS7 ELOCP26-201ENST00000436067 329 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 RSU1P2-202ENST00000437884 485 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 OR6C72P-201ENST00000451403 892 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AC126389.1-201ENST00000477436 290 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AP003034.1-201ENST00000534621 422 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AC090115.3-201ENST00000553218 849 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AL451007.1-201ENST00000595491 289 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AC010615.3-201ENST00000597319 394 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AC073413.2-201ENST00000604332 360 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AC138473.1-201ENST00000605717 526 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AC004492.1-201ENST00000607036 742 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AC008498.1-201ENST00000613012 531 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AC073968.1-201ENST00000618594 637 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 AC091953.2-201ENST00000623979 160 ntBASIC0.61□□□□□ -2.31
LINC00643Q86TS7 RNU6-60P-201ENST00000364792 103 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 MIR7-3-201ENST00000384898 110 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 MIR518D-201ENST00000385014 87 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 MIR34B-201ENST00000385076 84 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 MIR1290-201ENST00000408735 78 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 RPS24P7-201ENST00000416921 246 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LINC00643Q86TS7 GDI2P2-201ENST00000445131 608 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 MRPS17P3-201ENST00000465453 385 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 RPL9P9-202ENST00000466501 579 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 RPL30P12-201ENST00000474666 353 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 AC104687.1-201ENST00000485829 412 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC00643Q86TS7 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LINC00643Q86TS7 CCNG2P1-201ENST00000549521 1000 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC00643Q86TS7 AC021739.1-201ENST00000559631 174 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 MIR3660-201ENST00000584845 100 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 BX322635.1-201ENST00000605804 496 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 AC093673.2-201ENST00000609674 331 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 AL355472.4-201ENST00000610233 626 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 AC012676.2-201ENST00000619258 186 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 AC012314.7-201ENST00000619693 93 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 AP003072.5-201ENST00000623872 773 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC0.6□□□□□ -2.31
LINC00643Q86TS7 MFSD8-213ENST00000641134 1327 ntBASIC0.6□□□□□ -2.31
LINC00643Q86TS7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 RNU6-1222P-201ENST00000384615 107 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AL627390.1-201ENST00000396055 340 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 RNU6-1140P-201ENST00000410517 106 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 RPL21P90-201ENST00000415692 466 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 Z85994.2-201ENST00000434327 452 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 TAAR7P-201ENST00000436141 242 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 BMI1P1-201ENST00000445879 941 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AC245517.4-201ENST00000448601 281 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AP005660.1-201ENST00000522972 293 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AP003122.4-201ENST00000530980 758 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AC106785.1-201ENST00000565935 262 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AC023043.2-201ENST00000589678 1026 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AC116312.1-201ENST00000606841 314 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AC097504.2-201ENST00000608088 454 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.59□□□□□ -2.31
LINC00643Q86TS7 AC040168.1-201ENST00000623594 991 ntBASIC0.59□□□□□ -2.31
LINC00643Q86TS7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
LINC00643Q86TS7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.58□□□□□ -2.32
LINC00643Q86TS7 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.58□□□□□ -2.32
LINC00643Q86TS7 DEFB108F-201ENST00000344638 222 ntBASIC0.58□□□□□ -2.32
LINC00643Q86TS7 MIR515-2-201ENST00000384883 83 ntBASIC0.58□□□□□ -2.32
LINC00643Q86TS7 MIR515-1-201ENST00000384884 83 ntBASIC0.58□□□□□ -2.32
LINC00643Q86TS7 MIR504-201ENST00000385065 83 ntBASIC0.58□□□□□ -2.32
LINC00643Q86TS7 RN7SKP61-201ENST00000410642 295 ntBASIC0.58□□□□□ -2.32
LINC00643Q86TS7 AL449283.1-202ENST00000418249 604 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms