Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 AC025755.1-201ENST00000521306 278 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AP003122.3-201ENST00000526316 255 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AP002770.2-201ENST00000543613 532 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AL512310.1-201ENST00000548639 172 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AC009314.1-201ENST00000603871 304 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AC027449.1-201ENST00000608890 407 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AC107075.1-201ENST00000613695 314 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AC022960.3-201ENST00000619794 441 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 AC090772.4-201ENST00000623599 362 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 OR1S1-201ENST00000624470 978 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 MTCO1P23-201ENST00000415223 1526 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 GDI2P1-201ENST00000429312 1336 ntBASIC1.9□□□□□ -2.11
SMARCD3Q6STE5 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 FAM133CP-201ENST00000332869 704 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 HSPE1P11-201ENST00000339579 310 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 DEFB108F-201ENST00000344638 222 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 RNU6-216P-201ENST00000363282 104 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 RNU4-68P-201ENST00000364314 141 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 RNU6-413P-201ENST00000384115 107 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 RNU2-40P-201ENST00000410833 196 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 RNU6-920P-201ENST00000410926 92 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 MTATP6P20-201ENST00000414147 562 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 MTND2P9-201ENST00000422293 931 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 HMGN2P38-201ENST00000423806 265 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC098614.2-201ENST00000426040 255 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 PSMA6P3-201ENST00000428242 164 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 SRIP2-201ENST00000428470 166 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 UBE2FP3-201ENST00000436366 524 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 GPM6BP3-201ENST00000442797 145 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC005297.2-201ENST00000450430 606 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 DUXAP8-207ENST00000456786 622 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 USP9YP25-201ENST00000457708 443 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 RNU7-23P-201ENST00000459465 62 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 TMEM251P1-201ENST00000503717 318 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 HMGB1P28-201ENST00000507778 552 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 TPT1P8-201ENST00000510120 555 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 MIR514B-201ENST00000516774 80 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 DEFB108D-201ENST00000527787 222 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC005832.3-201ENST00000537929 631 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC125611.1-201ENST00000549563 229 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AL132857.1-201ENST00000555180 708 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC105224.1-201ENST00000587055 421 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 DUXAP10-204ENST00000612052 616 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC006386.1-201ENST00000619436 415 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 IGHVIII-44-202ENST00000636235 289 ntBASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SMARCD3Q6STE5 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 MTND5P6-201ENST00000422338 1798 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 RNU6-906P-201ENST00000384700 70 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 DHFRP6-201ENST00000401776 268 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AL590084.1-201ENST00000407885 387 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 RPS3AP24-201ENST00000407896 734 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 RNU6-584P-201ENST00000410350 95 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 SEPT2P1-201ENST00000419651 180 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 GTF2IP20-201ENST00000431663 360 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 USP9YP24-201ENST00000434374 697 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC092427.1-201ENST00000439177 601 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 USP9YP17-201ENST00000444617 696 ntBASIC1.88□□□□□ -2.11
SMARCD3Q6STE5 RPL7P36-201ENST00000444633 681 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms