Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RNU6-1003P-201ENST00000517099 105 ntBASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 AC025881.1-201ENST00000518851 512 ntBASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 SNRPGP16-201ENST00000533275 226 ntBASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 AL133271.1-201ENST00000538229 291 ntBASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 AC060771.1-201ENST00000582031 164 ntBASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 PIGPP4-201ENST00000584447 307 ntBASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 AC010338.1-201ENST00000621823 717 ntBASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 MTND4P4-201ENST00000439033 1366 ntBASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
RFWD3Q6PCD5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC062016.1-201ENST00000355719 319 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 RNU6-799P-201ENST00000363567 107 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 SNORD56.5-201ENST00000364281 72 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 SNORD116-1-201ENST00000384335 95 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 MIR1289-1-201ENST00000408836 144 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 MTND1P21-201ENST00000412991 285 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 CYCSP46-201ENST00000423569 204 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 OR4K11P-201ENST00000431829 904 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC004866.2-201ENST00000438285 481 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 RAC1P7-201ENST00000445367 377 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 Z96811.1-201ENST00000445880 108 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 COX6CP12-201ENST00000446748 202 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AL031183.1-201ENST00000457667 207 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 MTND4LP18-201ENST00000526864 291 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 ACTR3BP3-201ENST00000565577 979 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AP001429.1-201ENST00000602568 530 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC006023.1-201ENST00000603944 259 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC005046.1-201ENST00000608515 625 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 AC009268.2-201ENST00000621925 457 ntBASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RFWD3Q6PCD5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 SNORD116-9-201ENST00000384000 95 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 RNU6-637P-201ENST00000384050 107 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 SNORD116-3-201ENST00000384287 95 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 SNORD116-7-201ENST00000384404 95 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 RNU6-809P-201ENST00000384461 107 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 SNORD116-5-201ENST00000384462 95 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AL356057.3-201ENST00000402607 340 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AL136372.1-201ENST00000403060 228 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 RNA5SP21-201ENST00000410917 96 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC112220.1-201ENST00000434628 355 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 RPL23AP31-201ENST00000456160 467 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 RPL31P3-201ENST00000458430 332 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC117522.3-201ENST00000507974 584 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 SNORA31.8-201ENST00000516327 108 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC125611.2-201ENST00000551907 647 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC012065.4-201ENST00000602445 679 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC012443.1-201ENST00000605605 231 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC073114.1-201ENST00000612027 490 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC004696.1-201ENST00000614345 607 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AL450472.3-201ENST00000615578 367 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 AC027807.2-201ENST00000616099 408 ntBASIC2.81□□□□□ -1.96
RFWD3Q6PCD5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AC009812.4-201ENST00000569134 1805 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 Y_RNA.46-201ENST00000362695 102 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 SNORA25.6-201ENST00000364121 118 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 RNU5E-5P-201ENST00000365379 116 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 RPS3AP24-201ENST00000407896 734 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 RNA5SP184-201ENST00000411071 108 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 RNU6-516P-201ENST00000411381 104 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 NUP35P1-201ENST00000422734 947 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 ARL5AP4-201ENST00000430731 512 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AL109933.2-201ENST00000452651 260 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 AP000705.1-201ENST00000454567 350 ntBASIC2.8□□□□□ -1.96
RFWD3Q6PCD5 UBE2DNL-203ENST00000474922 222 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms