Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 SNORD3E-201ENST00000362899 217 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-890P-201ENST00000384121 107 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 MRPL42P3-201ENST00000401492 326 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 RNA5SP56-201ENST00000410277 118 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC099677.1-201ENST00000420575 175 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 PRSS3P4-201ENST00000453323 162 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 RNU7-167P-201ENST00000459160 62 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC116337.1-201ENST00000509680 687 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-1332P-201ENST00000516666 104 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 MIR4503-201ENST00000582187 83 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 MIR5692C1-201ENST00000585309 91 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 FAM157A-202ENST00000615155 405 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AL138721.1-201ENST00000616756 179 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC007998.5-201ENST00000622938 237 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 AC119674.1-207ENST00000641355 633 ntBASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PRPF40BQ6NWY9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 SCN1A-220ENST00000641603 12506 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 Y_RNA.364-201ENST00000365532 101 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 SNORA70E-201ENST00000384492 135 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 SNORA16.2-201ENST00000390991 127 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 SNORA68.2-201ENST00000391263 128 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 MIR1302-3-201ENST00000408128 138 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-985P-201ENST00000410182 104 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 MIR1911-201ENST00000410783 80 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 RNU4-78P-201ENST00000410940 126 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 ATG3P1-201ENST00000419507 911 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 MTCYBP9-201ENST00000431021 303 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 RPL23AP81-201ENST00000455252 467 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 AC097473.1-201ENST00000508142 408 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 SNORA25.10-201ENST00000515926 124 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 SNORA14.1-201ENST00000516113 141 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 Y_RNA.708-201ENST00000516950 96 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-323P-201ENST00000521915 107 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 AL161713.1-201ENST00000555538 145 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 AL359547.2-201ENST00000615810 418 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 U73479.1-201ENST00000618062 168 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 MIR6130-201ENST00000619419 109 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 PLCE1P1-201ENST00000622094 305 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 AC092608.2-201ENST00000624427 218 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 AC090337.1-201ENST00000579651 2074 ntBASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PRPF40BQ6NWY9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AC000123.3-201ENST00000624029 4975 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 ZNF807-201ENST00000328088 1707 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 Y_RNA.149-201ENST00000363558 117 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-715P-201ENST00000365204 103 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 Y_RNA.399-201ENST00000383955 105 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-331P-201ENST00000384724 107 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AL139039.1-201ENST00000401900 692 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AC093578.1-201ENST00000415219 368 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 RPS23P10-201ENST00000416185 486 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 RPL23AP69-201ENST00000431134 458 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AL121871.1-201ENST00000443413 436 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 GAPDHP27-201ENST00000447427 1020 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 RNA5SP246-201ENST00000458909 119 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AP001086.1-201ENST00000494882 321 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AC026726.1-201ENST00000512859 601 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 RNU6-677P-201ENST00000516914 101 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AC023442.1-201ENST00000531247 422 ntBASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
PRPF40BQ6NWY9 AC008269.2-201ENST00000561915 1105 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms