Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-1279P-201ENST00000383917 103 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 AC092447.6-201ENST00000414578 210 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 MTCO2P12-201ENST00000427426 682 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 SAR1AP4-201ENST00000429225 591 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.32□□□□□ -1.72
KRT40Q6A162 AC010655.1-201ENST00000449336 292 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 IFNWP4-201ENST00000453148 294 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 BX510359.1-201ENST00000456973 237 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.32□□□□□ -1.72
KRT40Q6A162 AC135721.1-201ENST00000497954 479 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 AC104619.4-201ENST00000510773 249 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 RNU2-10P-201ENST00000516375 211 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 RNU1-103P-201ENST00000516502 125 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 AC090281.1-201ENST00000523019 276 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 FAM60DP-201ENST00000524174 632 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.32□□□□□ -1.72
KRT40Q6A162 AC109635.4-202ENST00000531666 412 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.32□□□□□ -1.72
KRT40Q6A162 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.32□□□□□ -1.72
KRT40Q6A162 AL442663.2-201ENST00000554385 511 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 MTCO3P13-201ENST00000577757 781 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 MIR5583-1-201ENST00000580941 59 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.32□□□□□ -1.72
KRT40Q6A162 AL365204.3-201ENST00000612448 685 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 AC093913.1-201ENST00000614178 329 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.32□□□□□ -1.72
KRT40Q6A162 MIR7975-201ENST00000619350 68 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 AC011155.2-201ENST00000623202 216 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC4.32□□□□□ -1.72
KRT40Q6A162 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.32□□□□□ -1.72
KRT40Q6A162 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
KRT40Q6A162 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.32□□□□□ -1.72
KRT40Q6A162 Z73965.1-201ENST00000623412 2297 ntBASIC4.32□□□□□ -1.72
KRT40Q6A162 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRT40Q6A162 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.31□□□□□ -1.72
KRT40Q6A162 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRT40Q6A162 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
KRT40Q6A162 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.31□□□□□ -1.72
KRT40Q6A162 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
KRT40Q6A162 RNU4-66P-201ENST00000365199 138 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 RNU5E-6P-201ENST00000365574 115 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 RNA5SP424-201ENST00000390988 115 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 RNA5SP107-201ENST00000411358 122 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AC114491.1-201ENST00000416095 246 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC4.31□□□□□ -1.72
KRT40Q6A162 HSPE1P1-201ENST00000421494 318 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AL139247.1-201ENST00000422768 325 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 NDUFB1P1-201ENST00000435191 180 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 HSPD1P21-201ENST00000436541 245 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.31□□□□□ -1.72
KRT40Q6A162 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.31□□□□□ -1.72
KRT40Q6A162 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.31□□□□□ -1.72
KRT40Q6A162 CCDC34P1-201ENST00000507441 517 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.31□□□□□ -1.72
KRT40Q6A162 RN7SKP116-201ENST00000516902 319 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AP001804.3-201ENST00000525146 880 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AC008011.1-201ENST00000545989 227 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.31□□□□□ -1.72
KRT40Q6A162 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.31□□□□□ -1.72
KRT40Q6A162 AC067852.4-201ENST00000590314 478 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AC113139.1-201ENST00000605049 239 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 CTHRC1P1-201ENST00000605383 469 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AC104237.2-201ENST00000612456 443 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AP001486.3-201ENST00000615334 372 ntBASIC4.31□□□□□ -1.72
KRT40Q6A162 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.31□□□□□ -1.72
KRT40Q6A162 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.31□□□□□ -1.72
KRT40Q6A162 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
KRT40Q6A162 Y_RNA.162-201ENST00000363683 102 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRT40Q6A162 Y_RNA.493-201ENST00000384422 102 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KRT40Q6A162 SNORA48.2-201ENST00000390926 124 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 RNU6-278P-201ENST00000390945 109 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 RNU4-26P-201ENST00000410270 107 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 RN7SKP140-201ENST00000411196 284 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.3□□□□□ -1.72
KRT40Q6A162 AL451054.2-201ENST00000420896 202 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 AL591419.1-201ENST00000427423 339 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 AC093106.2-201ENST00000428212 385 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 AC008065.1-201ENST00000428525 348 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.3□□□□□ -1.72
KRT40Q6A162 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.3□□□□□ -1.72
KRT40Q6A162 HMGB3P11-201ENST00000440127 604 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KRT40Q6A162 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.3□□□□□ -1.72
KRT40Q6A162 HMGB3P21-201ENST00000452483 547 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 PPP1R2P5-201ENST00000457256 603 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.3□□□□□ -1.72
KRT40Q6A162 snoU109.4-201ENST00000458953 143 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.3□□□□□ -1.72
KRT40Q6A162 RN7SKP83-201ENST00000516512 178 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 RNU6-1038P-201ENST00000516516 104 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 RN7SKP82-201ENST00000516786 223 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 RN7SKP256-201ENST00000517201 314 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.3□□□□□ -1.72
KRT40Q6A162 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.3□□□□□ -1.72
KRT40Q6A162 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.3□□□□□ -1.72
KRT40Q6A162 AC005668.1-201ENST00000571142 476 ntBASIC4.3□□□□□ -1.72
KRT40Q6A162 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms