Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 AL139397.2-201ENST00000404529 772 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.48□□□□□ -1.69
E4F1Q66K89 AC119751.6-201ENST00000416712 186 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.48□□□□□ -1.69
E4F1Q66K89 RPS12P23-201ENST00000419579 400 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 RPL31P12-201ENST00000422587 358 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 AL669831.1-202ENST00000428504 417 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 HMGB1P27-201ENST00000431429 603 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 AL132765.1-201ENST00000434165 553 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.48□□□□□ -1.69
E4F1Q66K89 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.48□□□□□ -1.69
E4F1Q66K89 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.48□□□□□ -1.69
E4F1Q66K89 AC109327.1-201ENST00000471666 403 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 AC117503.1-201ENST00000472241 394 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.48□□□□□ -1.69
E4F1Q66K89 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.48□□□□□ -1.69
E4F1Q66K89 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.48□□□□□ -1.69
E4F1Q66K89 HNRNPCP4-201ENST00000571636 900 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 MIR4715-201ENST00000584117 79 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 SNORD84-203ENST00000584275 78 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.48□□□□□ -1.69
E4F1Q66K89 AC133104.2-201ENST00000615272 193 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 MIR6128-201ENST00000615528 109 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 ATP5A1P2-202ENST00000616464 443 ntBASIC4.48□□□□□ -1.69
E4F1Q66K89 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.48□□□□□ -1.69
E4F1Q66K89 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.48□□□□□ -1.69
E4F1Q66K89 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
E4F1Q66K89 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
E4F1Q66K89 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
E4F1Q66K89 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.48□□□□□ -1.69
E4F1Q66K89 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
E4F1Q66K89 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
E4F1Q66K89 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
E4F1Q66K89 Y_RNA.135-201ENST00000363439 95 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 RNU6-639P-201ENST00000384074 107 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 Y_RNA.459-201ENST00000384251 102 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
E4F1Q66K89 HMGN2P8-201ENST00000391458 268 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 AL391417.1-201ENST00000404100 426 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 RPS16P5-201ENST00000406501 404 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 RNU6-954P-201ENST00000411355 107 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 FAR2P2-201ENST00000413041 594 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 AL160275.3-201ENST00000423876 471 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 AL732292.1-201ENST00000426692 226 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 AC079780.1-201ENST00000428259 207 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.47□□□□□ -1.69
E4F1Q66K89 AL591704.1-201ENST00000432574 275 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
E4F1Q66K89 MIR2053-201ENST00000459295 91 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 RN7SL93P-201ENST00000463035 293 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 AF213884.1-201ENST00000488102 463 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.47□□□□□ -1.69
E4F1Q66K89 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.47□□□□□ -1.69
E4F1Q66K89 AC002456.2-201ENST00000509356 380 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 AC008958.1-201ENST00000511047 682 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 RNU6-1069P-201ENST00000516612 133 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.47□□□□□ -1.69
E4F1Q66K89 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.47□□□□□ -1.69
E4F1Q66K89 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.47□□□□□ -1.69
E4F1Q66K89 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
E4F1Q66K89 AL353748.2-201ENST00000622148 471 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 uc_338.22-201ENST00000622722 187 ntBASIC4.47□□□□□ -1.69
E4F1Q66K89 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
E4F1Q66K89 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.47□□□□□ -1.69
E4F1Q66K89 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.47□□□□□ -1.69
E4F1Q66K89 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
E4F1Q66K89 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
E4F1Q66K89 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.47□□□□□ -1.69
E4F1Q66K89 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
E4F1Q66K89 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
E4F1Q66K89 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
E4F1Q66K89 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.46□□□□□ -1.7
E4F1Q66K89 PRO1804-201ENST00000623780 2050 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
E4F1Q66K89 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
E4F1Q66K89 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
E4F1Q66K89 RNU1-18P-201ENST00000363062 164 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 Y_RNA.145-201ENST00000363527 102 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 RN7SKP103-201ENST00000363848 320 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 RNU1-132P-201ENST00000364300 164 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
E4F1Q66K89 MIR708-201ENST00000390708 88 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 AL445189.1-201ENST00000405722 338 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.46□□□□□ -1.7
E4F1Q66K89 PMCHL1-202ENST00000423102 261 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 AL590632.1-201ENST00000424289 371 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 RPL7P28-201ENST00000437739 740 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.46□□□□□ -1.7
E4F1Q66K89 ELOCP24-201ENST00000456370 334 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.46□□□□□ -1.7
E4F1Q66K89 AC087884.1-201ENST00000469738 328 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 AC146944.2-203ENST00000502493 354 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 VN1R104P-201ENST00000505115 1009 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 AL592156.1-201ENST00000508758 304 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 AC139495.1-202ENST00000513164 354 ntBASIC4.46□□□□□ -1.7
E4F1Q66K89 SMURF2P1-201ENST00000514992 481 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms