Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF20Q5VTR2 AC008958.1-201ENST00000511047 682 ntBASIC5.65□□□□□ -1.5
RNF20Q5VTR2 NDUFB4P9-201ENST00000511646 388 ntBASIC5.65□□□□□ -1.5
RNF20Q5VTR2 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF20Q5VTR2 AC109329.1-201ENST00000518744 317 ntBASIC5.65□□□□□ -1.5
RNF20Q5VTR2 AC130289.1-201ENST00000577321 73 ntBASIC5.65□□□□□ -1.5
RNF20Q5VTR2 LRRC37A5P-203ENST00000580181 585 ntBASIC5.65□□□□□ -1.5
RNF20Q5VTR2 MIR4646-201ENST00000580775 63 ntBASIC5.65□□□□□ -1.5
RNF20Q5VTR2 AC009779.6-201ENST00000603972 165 ntBASIC5.65□□□□□ -1.5
RNF20Q5VTR2 AL121917.1-203ENST00000605534 577 ntBASIC5.65□□□□□ -1.5
RNF20Q5VTR2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF20Q5VTR2 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
RNF20Q5VTR2 AC005183.1-201ENST00000603687 1979 ntBASIC5.65□□□□□ -1.51
RNF20Q5VTR2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.65□□□□□ -1.51
RNF20Q5VTR2 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF20Q5VTR2 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
RNF20Q5VTR2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
RNF20Q5VTR2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF20Q5VTR2 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF20Q5VTR2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF20Q5VTR2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RNF20Q5VTR2 PRO1804-201ENST00000623780 2050 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.324-201ENST00000365165 102 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 SNORA51.8-201ENST00000384234 132 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 RNU1-82P-201ENST00000390851 165 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 MTCO2P33-201ENST00000402100 465 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 RNU2-25P-201ENST00000411041 191 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 RNU6-607P-201ENST00000411283 108 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 RPL23AP25-201ENST00000430973 463 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 RANP8-201ENST00000444720 713 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 RPL7L1P1-201ENST00000448259 785 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF20Q5VTR2 AC126177.3-201ENST00000551839 688 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 AL355877.2-201ENST00000603670 358 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 MIR7155-201ENST00000615925 56 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 FTX_2.1-201ENST00000618816 94 ntBASIC5.64□□□□□ -1.51
RNF20Q5VTR2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF20Q5VTR2 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RNF20Q5VTR2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RNF20Q5VTR2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF20Q5VTR2 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RNF20Q5VTR2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF20Q5VTR2 SAGE2P-201ENST00000420011 2126 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.270-201ENST00000364693 104 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 RNU6-611P-201ENST00000384276 104 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 RNU6-1179P-201ENST00000384667 107 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 SNORA69.1-201ENST00000390904 137 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 AL109941.1-201ENST00000401925 229 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 RNU6-130P-201ENST00000411112 103 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 MYL8P-204ENST00000431574 518 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 TDGF1P1-201ENST00000445734 527 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 SCARNA22-201ENST00000503991 125 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 AC034114.1-201ENST00000520293 285 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 AC005951.2-201ENST00000576282 495 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 CPDP1-201ENST00000579660 283 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 AL391358.1-201ENST00000605342 190 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 AC123912.5-201ENST00000605470 343 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 AP001282.2-201ENST00000616149 309 ntBASIC5.63□□□□□ -1.51
RNF20Q5VTR2 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF20Q5VTR2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.29-201ENST00000362570 113 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.65-201ENST00000362846 100 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.84-201ENST00000363011 104 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.180-201ENST00000363867 113 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 Y_RNA.183-201ENST00000363882 113 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 RNU6-280P-201ENST00000364145 104 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 RNU6-178P-201ENST00000384631 104 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 AL645733.1-201ENST00000402250 217 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 RNU6-1203P-201ENST00000410703 110 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 AC007098.1-201ENST00000420122 367 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 RPS27AP12-201ENST00000429552 465 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 AC004383.1-201ENST00000438135 289 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF20Q5VTR2 RPEP5-201ENST00000441137 268 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 H2AFZP5-201ENST00000446960 382 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 AC079168.2-201ENST00000453977 416 ntBASIC5.62□□□□□ -1.51
RNF20Q5VTR2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms