Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 MTCO3P8-201ENST00000453691 755 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 RPL39P38-201ENST00000467018 153 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 AC069499.1-201ENST00000489433 509 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 RN7SL441P-201ENST00000492388 296 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 Y_RNA.680-201ENST00000516441 93 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 MIR3128-201ENST00000581957 66 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 AC005183.1-201ENST00000603687 1979 ntBASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
COL13A1Q5TAT6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 RNA5SP223-201ENST00000365174 120 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 Y_RNA.518-201ENST00000384552 113 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AL158071.1-201ENST00000430315 461 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AC009238.2-201ENST00000431026 355 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 NDUFB4P8-201ENST00000435351 367 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AC004866.2-201ENST00000438285 481 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AL031274.1-201ENST00000450334 232 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 RN7SL197P-201ENST00000466981 299 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AC018437.1-201ENST00000492214 406 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 HIGD1AP3-201ENST00000515857 278 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 SNORA25.11-201ENST00000515935 105 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 SNORA31.3-201ENST00000516029 96 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 Y_RNA.673-201ENST00000516306 88 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 IGKV2D-19-201ENST00000523346 262 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 OR4H12P-201ENST00000556269 907 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 MIR7853-201ENST00000584820 132 ntBASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.14□□□□□ -1.59
COL13A1Q5TAT6 AC005332.5-201ENST00000591222 2919 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 AC104260.2-201ENST00000623551 3497 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 AL031595.2-201ENST00000624215 19071 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 Y_RNA.214-201ENST00000364201 112 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 RNU4-50P-201ENST00000364361 141 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 MT-TW-201ENST00000387382 68 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 RNA5SP293-201ENST00000410527 113 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 BX276092.3-201ENST00000424182 230 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 AC139712.2-201ENST00000424302 339 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 AC138761.5-201ENST00000433967 325 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 AL589765.3-201ENST00000446084 462 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 FCF1P4-201ENST00000448326 183 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 RNU6-1095P-201ENST00000516148 108 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 AC087369.1-201ENST00000520775 996 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 VN1R91P-201ENST00000594377 169 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 HMGB1P50-201ENST00000605814 607 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 RNU6-85P-201ENST00000605989 107 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 AC005344.1-201ENST00000613391 459 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 SDR42E1P2-201ENST00000614861 481 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 uc_338.13-201ENST00000618243 179 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 AL354798.1-201ENST00000622505 329 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 GVINP1-202ENST00000531871 7271 ntBASIC5.13□□□□□ -1.59
COL13A1Q5TAT6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 AL451142.2-201ENST00000429076 2090 ntBASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.12□□□□□ -1.59
COL13A1Q5TAT6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms