Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 AC110792.2-201ENST00000510278 224 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AC105914.1-201ENST00000511798 226 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.43□□□□□ -2.18
NUP188Q5SRE5 NUTF2P8-201ENST00000604593 363 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AC211469.2-201ENST00000605461 205 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AC011472.4-201ENST00000615848 491 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AC021755.4-201ENST00000616620 456 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 ZNF519P1-201ENST00000449011 1626 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 SNORD56-201ENST00000413522 71 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AL031663.1-201ENST00000437445 219 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 NEFMP1-201ENST00000443423 1006 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.43□□□□□ -2.18
NUP188Q5SRE5 SETP11-201ENST00000473027 690 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 SYPL1P1-201ENST00000473622 768 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC1.43□□□□□ -2.18
NUP188Q5SRE5 ERHP1-201ENST00000523006 310 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AL136363.1-201ENST00000605349 337 ntBASIC1.43□□□□□ -2.18
NUP188Q5SRE5 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC1.43□□□□□ -2.18
NUP188Q5SRE5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.42□□□□□ -2.18
NUP188Q5SRE5 RNU6-1072P-201ENST00000384703 107 ntBASIC1.42□□□□□ -2.18
NUP188Q5SRE5 RNU6-443P-201ENST00000384780 107 ntBASIC1.42□□□□□ -2.18
NUP188Q5SRE5 RNU1-78P-201ENST00000391248 165 ntBASIC1.42□□□□□ -2.18
NUP188Q5SRE5 RPS20P15-201ENST00000412792 311 ntBASIC1.42□□□□□ -2.18
NUP188Q5SRE5 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.42□□□□□ -2.18
NUP188Q5SRE5 RPL7P30-201ENST00000420888 709 ntBASIC1.42□□□□□ -2.18
NUP188Q5SRE5 OR51AB1P-201ENST00000429046 620 ntBASIC1.42□□□□□ -2.18
NUP188Q5SRE5 UBE2V1P6-201ENST00000430840 422 ntBASIC1.42□□□□□ -2.18
NUP188Q5SRE5 PSPHP1-201ENST00000450062 261 ntBASIC1.42□□□□□ -2.18
NUP188Q5SRE5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC1.42□□□□□ -2.18
NUP188Q5SRE5 RPL30P12-201ENST00000474666 353 ntBASIC1.42□□□□□ -2.18
NUP188Q5SRE5 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.42□□□□□ -2.18
NUP188Q5SRE5 HSPE1P4-201ENST00000550617 308 ntBASIC1.42□□□□□ -2.18
NUP188Q5SRE5 AL590095.2-201ENST00000604136 117 ntBASIC1.42□□□□□ -2.18
NUP188Q5SRE5 RNU6-697P-201ENST00000363348 107 ntBASIC1.41□□□□□ -2.18
NUP188Q5SRE5 Y_RNA.258-201ENST00000364613 105 ntBASIC1.41□□□□□ -2.18
NUP188Q5SRE5 Y_RNA.433-201ENST00000384089 102 ntBASIC1.41□□□□□ -2.18
NUP188Q5SRE5 MIR320B1-201ENST00000390209 79 ntBASIC1.41□□□□□ -2.18
NUP188Q5SRE5 AL512504.1-201ENST00000415494 778 ntBASIC1.41□□□□□ -2.18
NUP188Q5SRE5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.41□□□□□ -2.18
NUP188Q5SRE5 Z77249.1-201ENST00000444622 1175 ntBASIC1.41□□□□□ -2.18
NUP188Q5SRE5 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.41□□□□□ -2.18
NUP188Q5SRE5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
NUP188Q5SRE5 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.41□□□□□ -2.18
NUP188Q5SRE5 NDUFS5P6-201ENST00000529136 295 ntBASIC1.41□□□□□ -2.18
NUP188Q5SRE5 AL096840.1-201ENST00000603287 93 ntBASIC1.41□□□□□ -2.18
NUP188Q5SRE5 AC097655.1-201ENST00000635075 318 ntBASIC1.41□□□□□ -2.18
NUP188Q5SRE5 AC068620.4-201ENST00000636730 1182 ntBASIC1.41□□□□□ -2.18
NUP188Q5SRE5 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.4□□□□□ -2.18
NUP188Q5SRE5 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.4□□□□□ -2.18
NUP188Q5SRE5 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.4□□□□□ -2.18
NUP188Q5SRE5 SNORA31.8-201ENST00000516327 108 ntBASIC1.4□□□□□ -2.18
NUP188Q5SRE5 AC025918.2-201ENST00000558683 763 ntBASIC1.4□□□□□ -2.18
NUP188Q5SRE5 U73023.1-201ENST00000603134 700 ntBASIC1.4□□□□□ -2.18
NUP188Q5SRE5 AL161629.2-201ENST00000615347 275 ntBASIC1.4□□□□□ -2.18
NUP188Q5SRE5 RNU1-62P-201ENST00000362599 164 ntBASIC1.4□□□□□ -2.19
NUP188Q5SRE5 HMGB1P49-201ENST00000418882 569 ntBASIC1.4□□□□□ -2.19
NUP188Q5SRE5 MTCYBP29-201ENST00000436327 1006 ntBASIC1.4□□□□□ -2.19
NUP188Q5SRE5 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.4□□□□□ -2.19
NUP188Q5SRE5 AC025768.1-201ENST00000510057 267 ntBASIC1.4□□□□□ -2.19
NUP188Q5SRE5 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
NUP188Q5SRE5 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
NUP188Q5SRE5 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC1.4□□□□□ -2.19
NUP188Q5SRE5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.4□□□□□ -2.19
NUP188Q5SRE5 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
NUP188Q5SRE5 SNORA62.1-201ENST00000364287 154 ntBASIC1.39□□□□□ -2.19
NUP188Q5SRE5 CISD1P1-201ENST00000393907 327 ntBASIC1.39□□□□□ -2.19
NUP188Q5SRE5 EZH2P1-201ENST00000431167 291 ntBASIC1.39□□□□□ -2.19
NUP188Q5SRE5 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
NUP188Q5SRE5 AC015908.1-201ENST00000478739 476 ntBASIC1.39□□□□□ -2.19
NUP188Q5SRE5 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.39□□□□□ -2.19
NUP188Q5SRE5 IMMP1LP2-201ENST00000552954 492 ntBASIC1.39□□□□□ -2.19
NUP188Q5SRE5 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.39□□□□□ -2.19
NUP188Q5SRE5 MIR4295-201ENST00000585286 85 ntBASIC1.39□□□□□ -2.19
NUP188Q5SRE5 SDR42E1P2-201ENST00000614861 481 ntBASIC1.39□□□□□ -2.19
NUP188Q5SRE5 AC007742.2-201ENST00000618226 398 ntBASIC1.39□□□□□ -2.19
NUP188Q5SRE5 SDR42E1P4-201ENST00000620894 481 ntBASIC1.39□□□□□ -2.19
NUP188Q5SRE5 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC1.39□□□□□ -2.19
NUP188Q5SRE5 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.39□□□□□ -2.19
NUP188Q5SRE5 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NUP188Q5SRE5 MIR330-201ENST00000362196 94 ntBASIC1.38□□□□□ -2.19
NUP188Q5SRE5 SNORD114-23-201ENST00000363536 72 ntBASIC1.38□□□□□ -2.19
NUP188Q5SRE5 RNU4-38P-201ENST00000364472 129 ntBASIC1.38□□□□□ -2.19
NUP188Q5SRE5 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.38□□□□□ -2.19
NUP188Q5SRE5 GPM6BP3-201ENST00000442797 145 ntBASIC1.38□□□□□ -2.19
NUP188Q5SRE5 OR6K5P-201ENST00000447050 945 ntBASIC1.38□□□□□ -2.19
NUP188Q5SRE5 AL627224.1-201ENST00000448334 444 ntBASIC1.38□□□□□ -2.19
NUP188Q5SRE5 AC093852.1-201ENST00000503587 266 ntBASIC1.38□□□□□ -2.19
NUP188Q5SRE5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.38□□□□□ -2.19
NUP188Q5SRE5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.38□□□□□ -2.19
NUP188Q5SRE5 AC006963.1-201ENST00000624003 1052 ntBASIC1.38□□□□□ -2.19
NUP188Q5SRE5 AL390862.1-201ENST00000635467 1469 ntBASIC1.38□□□□□ -2.19
NUP188Q5SRE5 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NUP188Q5SRE5 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.37□□□□□ -2.19
NUP188Q5SRE5 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms