Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC93Q567U6 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC93Q567U6 TNPO1P3-201ENST00000436471 2662 ntBASIC4.29□□□□□ -1.72
CCDC93Q567U6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCDC93Q567U6 Z83843.1-201ENST00000604070 3685 ntBASIC4.29□□□□□ -1.72
CCDC93Q567U6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC93Q567U6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC93Q567U6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CCDC93Q567U6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC93Q567U6 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC93Q567U6 RNU6-1097P-201ENST00000363586 107 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 RNU6-1322P-201ENST00000364309 107 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 DEFB109C-201ENST00000382575 264 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 DEFB109B-201ENST00000382656 264 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC93Q567U6 RPS4XP8-201ENST00000402039 771 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 RN7SKP53-201ENST00000411337 315 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 AL109913.1-201ENST00000421173 514 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC93Q567U6 NDUFB1P1-201ENST00000435191 180 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 RNU7-59P-201ENST00000459101 61 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 RNA5SP341-201ENST00000516261 117 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC93Q567U6 AC104383.1-201ENST00000530297 370 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 AP000857.1-201ENST00000532151 543 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC93Q567U6 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC93Q567U6 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC93Q567U6 SYF2P1-201ENST00000550658 413 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 AL121579.1-201ENST00000555129 305 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC93Q567U6 MIR4276-201ENST00000584832 70 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 AC007621.1-201ENST00000604544 437 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 AL031176.1-201ENST00000604554 466 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 AL357078.3-201ENST00000607528 618 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 AC093788.1-201ENST00000609356 927 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 DUXAP9-208ENST00000622815 614 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 AC019226.1-201ENST00000625666 515 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC93Q567U6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
CCDC93Q567U6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC93Q567U6 AL645937.1-201ENST00000641739 1652 ntBASIC4.28□□□□□ -1.72
CCDC93Q567U6 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
CCDC93Q567U6 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.73
CCDC93Q567U6 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC93Q567U6 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC93Q567U6 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 AL035425.3-201ENST00000564206 4996 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 RNU6-1120P-201ENST00000362988 108 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 CCDC58P2-201ENST00000417131 366 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 AL139413.1-201ENST00000421309 217 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 RPL7P54-201ENST00000438336 674 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 HMGB3P12-201ENST00000438745 556 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 RPL21P13-201ENST00000488305 481 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 AC110794.1-201ENST00000505816 425 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 FCF1P8-201ENST00000510322 597 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 RNU6-1281P-201ENST00000516223 105 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC93Q567U6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 AL133271.1-201ENST00000538229 291 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 BRDTP1-201ENST00000605735 677 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 AL360181.4-201ENST00000621752 134 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 AC005609.4-201ENST00000625071 447 ntBASIC4.27□□□□□ -1.73
CCDC93Q567U6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCDC93Q567U6 MTCO1P9-201ENST00000505577 1534 ntBASIC4.26□□□□□ -1.73
CCDC93Q567U6 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CCDC93Q567U6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC93Q567U6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC93Q567U6 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC93Q567U6 RNU6-877P-201ENST00000383868 107 ntBASIC4.26□□□□□ -1.73
CCDC93Q567U6 RNU6-278P-201ENST00000390945 109 ntBASIC4.26□□□□□ -1.73
CCDC93Q567U6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC93Q567U6 AL391417.1-201ENST00000404100 426 ntBASIC4.26□□□□□ -1.73
CCDC93Q567U6 HSPE1P8-201ENST00000406997 288 ntBASIC4.26□□□□□ -1.73
CCDC93Q567U6 DUTP6-201ENST00000425573 462 ntBASIC4.26□□□□□ -1.73
CCDC93Q567U6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC93Q567U6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC93Q567U6 OR4K11P-201ENST00000431829 904 ntBASIC4.26□□□□□ -1.73
CCDC93Q567U6 RPL23AP30-201ENST00000432419 501 ntBASIC4.26□□□□□ -1.73
CCDC93Q567U6 SETP5-201ENST00000437270 562 ntBASIC4.26□□□□□ -1.73
CCDC93Q567U6 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC93Q567U6 AC079781.2-201ENST00000446424 169 ntBASIC4.26□□□□□ -1.73
CCDC93Q567U6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC93Q567U6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC93Q567U6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms