Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC069439.1-201ENST00000494739 167 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 RNA5SP164-201ENST00000516533 110 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AC090572.1-201ENST00000519251 160 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 KLKP1-201ENST00000595979 403 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AL133393.1-201ENST00000603277 287 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AP001330.5-201ENST00000607176 411 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AC099778.2-201ENST00000610904 211 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 AC009161.2-201ENST00000624626 138 ntBASIC4.18□□□□□ -1.74
LONRF3Q496Y0 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.18□□□□□ -1.74
LONRF3Q496Y0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 CR848007.1-201ENST00000442354 1699 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 OR1S2-201ENST00000302592 978 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 Y_RNA.89-201ENST00000363031 102 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 SNORA14A-201ENST00000364773 135 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 RNU5E-4P-201ENST00000364931 120 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC110754.1-201ENST00000399740 601 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 MRPL50P2-201ENST00000416821 482 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC137499.1-201ENST00000427602 88 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC093156.1-201ENST00000440382 670 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 MTCO3P45-201ENST00000443036 613 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC009237.8-201ENST00000445492 379 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC108059.3-201ENST00000456388 214 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 RPS20P20-201ENST00000460498 340 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC006483.1-201ENST00000487308 313 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC104619.4-201ENST00000510773 249 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC074344.1-201ENST00000512823 224 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 MTND1P35-201ENST00000526739 508 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AP003072.2-201ENST00000527756 676 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC002545.1-201ENST00000592511 181 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 RNU1-30P-201ENST00000606575 163 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AP003122.6-201ENST00000623831 495 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 AC009093.8-201ENST00000641769 292 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 FAM35BP-202ENST00000497389 3337 ntBASIC4.17□□□□□ -1.74
LONRF3Q496Y0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
LONRF3Q496Y0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LONRF3Q496Y0 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LONRF3Q496Y0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 RNU6-534P-201ENST00000364877 106 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 Y_RNA.295-201ENST00000364918 102 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 RNU6-108P-201ENST00000365558 107 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 Y_RNA.481-201ENST00000384373 102 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 AC002075.2-201ENST00000425207 252 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.16□□□□□ -1.74
LONRF3Q496Y0 RPL23AP30-201ENST00000432419 501 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 GPR143P-201ENST00000434155 205 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 DPPA3P1-201ENST00000448050 469 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 SCARNA15.2-201ENST00000516409 127 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.16□□□□□ -1.74
LONRF3Q496Y0 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.16□□□□□ -1.74
LONRF3Q496Y0 AC123904.3-201ENST00000547218 814 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 MIR4738-201ENST00000579134 87 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 MIR3922-201ENST00000585192 84 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 Z84480.1-201ENST00000605131 311 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 AC008536.2-201ENST00000607284 349 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.16□□□□□ -1.74
LONRF3Q496Y0 AC119674.1-207ENST00000641355 633 ntBASIC4.16□□□□□ -1.74
LONRF3Q496Y0 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LONRF3Q496Y0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.15□□□□□ -1.74
LONRF3Q496Y0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LONRF3Q496Y0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LONRF3Q496Y0 Y_RNA.333-201ENST00000365274 102 ntBASIC4.15□□□□□ -1.75
LONRF3Q496Y0 MIR449B-201ENST00000384995 97 ntBASIC4.15□□□□□ -1.75
LONRF3Q496Y0 MIR325-201ENST00000385260 98 ntBASIC4.15□□□□□ -1.75
LONRF3Q496Y0 AC068050.1-201ENST00000394891 380 ntBASIC4.15□□□□□ -1.75
LONRF3Q496Y0 RPS4XP8-201ENST00000402039 771 ntBASIC4.15□□□□□ -1.75
LONRF3Q496Y0 Z98941.1-201ENST00000407764 100 ntBASIC4.15□□□□□ -1.75
LONRF3Q496Y0 RNU2-62P-201ENST00000410868 191 ntBASIC4.15□□□□□ -1.75
LONRF3Q496Y0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LONRF3Q496Y0 SYF2P2-201ENST00000417620 583 ntBASIC4.15□□□□□ -1.75
LONRF3Q496Y0 RPL30P16-201ENST00000419341 429 ntBASIC4.15□□□□□ -1.75
LONRF3Q496Y0 AL109913.1-201ENST00000421173 514 ntBASIC4.15□□□□□ -1.75
LONRF3Q496Y0 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.15□□□□□ -1.75
LONRF3Q496Y0 HMGN2P31-201ENST00000432430 273 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 203.7 ms