Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 USP9YP27-201ENST00000418455 438 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.32□□□□□ -2.04
RFX4Q33E94 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX4Q33E94 AC009414.1-201ENST00000427200 443 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 UBE2V1P13-201ENST00000436983 439 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 CYCSP32-201ENST00000440548 321 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.32□□□□□ -2.04
RFX4Q33E94 MTCYBP3-201ENST00000445588 1137 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RFX4Q33E94 RNU6-928P-201ENST00000516876 104 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 NRON-201ENST00000517270 370 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 AP003467.2-201ENST00000520175 319 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RFX4Q33E94 AP004247.1-201ENST00000531556 1289 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX4Q33E94 AC124947.2-202ENST00000552735 133 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX4Q33E94 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX4Q33E94 ACTR3BP3-201ENST00000565577 979 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.32□□□□□ -2.04
RFX4Q33E94 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX4Q33E94 BNIP3P23-201ENST00000599655 511 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 AL357094.1-201ENST00000603845 844 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 AC112204.3-201ENST00000623822 332 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 AC007490.1-201ENST00000624321 703 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 AL137790.1-201ENST00000634283 177 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 AC093536.2-201ENST00000565257 1406 ntBASIC2.32□□□□□ -2.04
RFX4Q33E94 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RFX4Q33E94 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RFX4Q33E94 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RFX4Q33E94 MIR19A-201ENST00000384878 82 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 SNORA48.2-201ENST00000390926 124 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AL360182.1-201ENST00000397433 468 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AC119751.3-201ENST00000399720 670 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RFX4Q33E94 CCNG1P1-201ENST00000406783 885 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AL359704.1-201ENST00000411586 781 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.31□□□□□ -2.04
RFX4Q33E94 Z85995.1-201ENST00000415547 335 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 HIGD1AP15-201ENST00000416198 280 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AC098826.1-201ENST00000433943 471 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 UBE2FP3-201ENST00000436366 524 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 LARP1BP3-201ENST00000437229 869 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 RPS15AP7-201ENST00000439294 405 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.31□□□□□ -2.04
RFX4Q33E94 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.31□□□□□ -2.04
RFX4Q33E94 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.31□□□□□ -2.04
RFX4Q33E94 AC092798.1-201ENST00000458542 409 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 MTND2P14-201ENST00000482139 351 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AC106872.3-201ENST00000495104 446 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AC107222.1-201ENST00000510899 637 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.31□□□□□ -2.04
RFX4Q33E94 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.31□□□□□ -2.04
RFX4Q33E94 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.31□□□□□ -2.04
RFX4Q33E94 AL133153.1-201ENST00000557756 303 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AMZ2P1-203ENST00000565833 850 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.31□□□□□ -2.04
RFX4Q33E94 HMGB1P6-201ENST00000569046 646 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.31□□□□□ -2.04
RFX4Q33E94 OR1M4P-201ENST00000589199 287 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.31□□□□□ -2.04
RFX4Q33E94 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.31□□□□□ -2.04
RFX4Q33E94 AC022022.2-201ENST00000602989 360 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AL031667.3-201ENST00000620124 655 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 AL159972.1-201ENST00000625150 448 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.31□□□□□ -2.04
RFX4Q33E94 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.31□□□□□ -2.04
RFX4Q33E94 OR5H6-203ENST00000642105 978 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.31□□□□□ -2.04
RFX4Q33E94 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RFX4Q33E94 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RFX4Q33E94 ZNF833P-201ENST00000424938 1494 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 CCT4P2-201ENST00000233836 1548 ntBASIC2.31□□□□□ -2.04
RFX4Q33E94 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
RFX4Q33E94 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.3□□□□□ -2.04
RFX4Q33E94 Z82209.1-201ENST00000422141 2135 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFX4Q33E94 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFX4Q33E94 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RFX4Q33E94 RNU6-660P-201ENST00000364566 109 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
RFX4Q33E94 AL513475.1-201ENST00000406602 315 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.3□□□□□ -2.04
RFX4Q33E94 UBE2FP1-201ENST00000416536 447 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC2.3□□□□□ -2.04
RFX4Q33E94 AL512844.2-201ENST00000433990 593 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 AL354941.1-201ENST00000438600 464 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 AC009296.1-201ENST00000443146 155 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 AL513328.1-201ENST00000446460 224 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.3□□□□□ -2.04
RFX4Q33E94 RPL31P41-201ENST00000477967 372 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 RPS15AP36-201ENST00000492022 382 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.3□□□□□ -2.04
RFX4Q33E94 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.3□□□□□ -2.04
RFX4Q33E94 RNU1-104P-201ENST00000517280 175 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.3□□□□□ -2.04
RFX4Q33E94 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.3□□□□□ -2.04
RFX4Q33E94 PRELID2P1-201ENST00000552837 301 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms