Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 RNU6-35P-201ENST00000384530 107 ntBASIC1.69□□□□□ -2.14
HMGXB3Q12766 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.69□□□□□ -2.14
HMGXB3Q12766 AC023347.2-201ENST00000433994 462 ntBASIC1.69□□□□□ -2.14
HMGXB3Q12766 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.69□□□□□ -2.14
HMGXB3Q12766 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.69□□□□□ -2.14
HMGXB3Q12766 HMGB3P17-201ENST00000504195 649 ntBASIC1.69□□□□□ -2.14
HMGXB3Q12766 AC079148.1-201ENST00000565944 819 ntBASIC1.69□□□□□ -2.14
HMGXB3Q12766 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.69□□□□□ -2.14
HMGXB3Q12766 PGBD4P6-201ENST00000421501 610 ntBASIC1.68□□□□□ -2.14
HMGXB3Q12766 AC096632.1-201ENST00000427395 310 ntBASIC1.68□□□□□ -2.14
HMGXB3Q12766 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.68□□□□□ -2.14
HMGXB3Q12766 EZH2P1-201ENST00000431167 291 ntBASIC1.68□□□□□ -2.14
HMGXB3Q12766 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.68□□□□□ -2.14
HMGXB3Q12766 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.68□□□□□ -2.14
HMGXB3Q12766 AC092451.2-201ENST00000538746 658 ntBASIC1.68□□□□□ -2.14
HMGXB3Q12766 AC069304.3-201ENST00000603938 1084 ntBASIC1.68□□□□□ -2.14
HMGXB3Q12766 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
HMGXB3Q12766 AC100821.1-201ENST00000523153 2479 ntBASIC1.68□□□□□ -2.14
HMGXB3Q12766 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC1.67□□□□□ -2.14
HMGXB3Q12766 MIR627-201ENST00000384979 97 ntBASIC1.67□□□□□ -2.14
HMGXB3Q12766 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
HMGXB3Q12766 AC008850.1-201ENST00000427546 362 ntBASIC1.67□□□□□ -2.14
HMGXB3Q12766 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGXB3Q12766 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGXB3Q12766 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.67□□□□□ -2.14
HMGXB3Q12766 AL035407.2-201ENST00000454090 378 ntBASIC1.67□□□□□ -2.14
HMGXB3Q12766 AC010301.1-201ENST00000473936 355 ntBASIC1.67□□□□□ -2.14
HMGXB3Q12766 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HMGXB3Q12766 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HMGXB3Q12766 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.67□□□□□ -2.14
HMGXB3Q12766 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.67□□□□□ -2.14
HMGXB3Q12766 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.67□□□□□ -2.14
HMGXB3Q12766 FAM71BP1-201ENST00000604431 523 ntBASIC1.67□□□□□ -2.14
HMGXB3Q12766 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HMGXB3Q12766 RNU4-72P-201ENST00000410754 173 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 AC073592.7-201ENST00000623659 507 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.66□□□□□ -2.14
HMGXB3Q12766 AL390862.1-201ENST00000635467 1469 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMGXB3Q12766 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HMGXB3Q12766 OR1L1-202ENST00000373686 1083 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 RNU6-532P-201ENST00000384318 107 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 SNORA46.1-201ENST00000391069 153 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 SNORA81-201ENST00000408493 178 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 UBE2V1P9-201ENST00000414760 368 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.66□□□□□ -2.14
HMGXB3Q12766 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 DUXAP8-207ENST00000456786 622 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 AC087879.1-201ENST00000474343 374 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGXB3Q12766 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGXB3Q12766 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGXB3Q12766 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.66□□□□□ -2.14
HMGXB3Q12766 AL590282.1-201ENST00000610379 1136 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.66□□□□□ -2.14
HMGXB3Q12766 AC011330.2-201ENST00000621680 635 ntBASIC1.66□□□□□ -2.14
HMGXB3Q12766 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
HMGXB3Q12766 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
HMGXB3Q12766 RNU6-716P-201ENST00000365621 103 ntBASIC1.65□□□□□ -2.15
HMGXB3Q12766 AC096533.1-201ENST00000411645 353 ntBASIC1.65□□□□□ -2.15
HMGXB3Q12766 HMGB1P49-201ENST00000418882 569 ntBASIC1.65□□□□□ -2.15
HMGXB3Q12766 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGXB3Q12766 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.65□□□□□ -2.15
HMGXB3Q12766 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.65□□□□□ -2.15
HMGXB3Q12766 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HMGXB3Q12766 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.65□□□□□ -2.15
HMGXB3Q12766 MTND3P24-201ENST00000506306 329 ntBASIC1.65□□□□□ -2.15
HMGXB3Q12766 AC022690.1-201ENST00000526681 550 ntBASIC1.65□□□□□ -2.15
HMGXB3Q12766 NDUFS5P6-201ENST00000529136 295 ntBASIC1.65□□□□□ -2.15
HMGXB3Q12766 AC080100.1-201ENST00000624239 5356 ntBASIC1.65□□□□□ -2.15
HMGXB3Q12766 MTND4P12-201ENST00000498999 1377 ntBASIC1.64□□□□□ -2.15
HMGXB3Q12766 RNU6-697P-201ENST00000363348 107 ntBASIC1.64□□□□□ -2.15
HMGXB3Q12766 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGXB3Q12766 AL031663.1-201ENST00000437445 219 ntBASIC1.64□□□□□ -2.15
HMGXB3Q12766 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.64□□□□□ -2.15
HMGXB3Q12766 RN7SKP277-201ENST00000516895 283 ntBASIC1.64□□□□□ -2.15
HMGXB3Q12766 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGXB3Q12766 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.64□□□□□ -2.15
HMGXB3Q12766 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
HMGXB3Q12766 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
HMGXB3Q12766 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.63□□□□□ -2.15
HMGXB3Q12766 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC1.63□□□□□ -2.15
HMGXB3Q12766 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.63□□□□□ -2.15
HMGXB3Q12766 PRELID3BP4-201ENST00000515476 571 ntBASIC1.63□□□□□ -2.15
HMGXB3Q12766 NUTF2P8-201ENST00000604593 363 ntBASIC1.63□□□□□ -2.15
HMGXB3Q12766 MIR6513-201ENST00000621188 64 ntBASIC1.63□□□□□ -2.15
HMGXB3Q12766 HAUS6P2-201ENST00000433254 2404 ntBASIC1.63□□□□□ -2.15
HMGXB3Q12766 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
HMGXB3Q12766 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
HMGXB3Q12766 KLRA1P-201ENST00000503499 986 ntBASIC1.62□□□□□ -2.15
HMGXB3Q12766 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGXB3Q12766 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.62□□□□□ -2.15
HMGXB3Q12766 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.62□□□□□ -2.15
HMGXB3Q12766 AC106791.2-201ENST00000604680 391 ntBASIC1.62□□□□□ -2.15
HMGXB3Q12766 AC020658.4-201ENST00000613987 684 ntBASIC1.62□□□□□ -2.15
HMGXB3Q12766 RNU1-62P-201ENST00000362599 164 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 HNRNPDP2-201ENST00000406475 478 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 AL512504.1-201ENST00000415494 778 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 GPM6BP3-201ENST00000442797 145 ntBASIC1.61□□□□□ -2.15
HMGXB3Q12766 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms