Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AL020997.2-201ENST00000602607 184 ntBASIC2.54□□□□□ -2
CKAP4Q07065 BCRP9-201ENST00000605312 388 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AL390208.1-201ENST00000605885 644 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AC097468.3-201ENST00000607956 456 ntBASIC2.54□□□□□ -2
CKAP4Q07065 AC092140.2-201ENST00000618027 521 ntBASIC2.54□□□□□ -2
CKAP4Q07065 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.54□□□□□ -2
CKAP4Q07065 MTND4P4-201ENST00000439033 1366 ntBASIC2.53□□□□□ -2
CKAP4Q07065 ZNF720P1-201ENST00000562403 1939 ntBASIC2.53□□□□□ -2
CKAP4Q07065 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
CKAP4Q07065 RNU6-623P-201ENST00000363143 105 ntBASIC2.53□□□□□ -2
CKAP4Q07065 RNU6-289P-201ENST00000364093 107 ntBASIC2.53□□□□□ -2
CKAP4Q07065 Y_RNA.553-201ENST00000384670 102 ntBASIC2.53□□□□□ -2
CKAP4Q07065 MIR144-201ENST00000384886 86 ntBASIC2.53□□□□□ -2
CKAP4Q07065 MIR7-3-201ENST00000384898 110 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AL356057.2-201ENST00000403318 432 ntBASIC2.53□□□□□ -2
CKAP4Q07065 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.53□□□□□ -2
CKAP4Q07065 RPS27AP14-201ENST00000422868 454 ntBASIC2.53□□□□□ -2
CKAP4Q07065 PSMA6P3-201ENST00000428242 164 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AC079780.1-201ENST00000428259 207 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.53□□□□□ -2
CKAP4Q07065 LSM1P1-201ENST00000438629 273 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AL831737.1-201ENST00000441288 271 ntBASIC2.53□□□□□ -2
CKAP4Q07065 COX6CP12-201ENST00000446748 202 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AL592447.1-201ENST00000447592 540 ntBASIC2.53□□□□□ -2
CKAP4Q07065 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.53□□□□□ -2
CKAP4Q07065 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.53□□□□□ -2
CKAP4Q07065 AC106872.3-201ENST00000495104 446 ntBASIC2.53□□□□□ -2
CKAP4Q07065 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.53□□□□□ -2
CKAP4Q07065 AC010424.1-201ENST00000506336 297 ntBASIC2.53□□□□□ -2
CKAP4Q07065 TTC39CP1-201ENST00000512513 755 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AC093677.1-201ENST00000514414 678 ntBASIC2.53□□□□□ -2
CKAP4Q07065 Y_RNA.655-201ENST00000515919 96 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.53□□□□□ -2
CKAP4Q07065 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.53□□□□□ -2
CKAP4Q07065 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC2.53□□□□□ -2
CKAP4Q07065 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.53□□□□□ -2
CKAP4Q07065 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.53□□□□□ -2
CKAP4Q07065 AP005205.1-201ENST00000563503 508 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AC053481.3-201ENST00000577881 843 ntBASIC2.53□□□□□ -2
CKAP4Q07065 MIR4446-201ENST00000578505 67 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AC103987.3-201ENST00000582071 292 ntBASIC2.53□□□□□ -2
CKAP4Q07065 RSL24D1P11-201ENST00000591045 491 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AC012065.4-201ENST00000602445 679 ntBASIC2.53□□□□□ -2
CKAP4Q07065 U73023.1-201ENST00000603134 700 ntBASIC2.53□□□□□ -2
CKAP4Q07065 RN7SKP299-201ENST00000606679 301 ntBASIC2.53□□□□□ -2
CKAP4Q07065 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CKAP4Q07065 AC009509.4-201ENST00000619202 509 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AC009878.1-201ENST00000621819 340 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AL161637.1-201ENST00000622380 412 ntBASIC2.53□□□□□ -2
CKAP4Q07065 FO624990.1-201ENST00000636373 85 ntBASIC2.53□□□□□ -2
CKAP4Q07065 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.53□□□□□ -2
CKAP4Q07065 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CKAP4Q07065 RNU5F-6P-201ENST00000362979 116 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 Y_RNA.194-201ENST00000363985 102 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 RNU6-769P-201ENST00000384407 104 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 RNU6-821P-201ENST00000390995 107 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 MIR320C1-201ENST00000408566 88 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.52□□□□□ -2.01
CKAP4Q07065 RN7SKP142-201ENST00000411236 328 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.52□□□□□ -2.01
CKAP4Q07065 MTATP6P27-201ENST00000416987 621 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AC006366.1-201ENST00000422002 759 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.52□□□□□ -2.01
CKAP4Q07065 AL671855.1-201ENST00000446875 1203 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.52□□□□□ -2.01
CKAP4Q07065 SNRPGP9-201ENST00000456025 225 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 RNA5SP269-201ENST00000459032 137 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.52□□□□□ -2.01
CKAP4Q07065 MTND4P2-201ENST00000507767 1203 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 CBX3P3-201ENST00000508108 532 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.52□□□□□ -2.01
CKAP4Q07065 AC091965.2-201ENST00000512324 613 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CKAP4Q07065 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.52□□□□□ -2.01
CKAP4Q07065 AC022080.3-201ENST00000544433 482 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.52□□□□□ -2.01
CKAP4Q07065 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CKAP4Q07065 MIR4307-201ENST00000582802 84 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 MIR3158-1-201ENST00000583596 81 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.52□□□□□ -2.01
CKAP4Q07065 AC119751.7-201ENST00000600494 245 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 RPL12P50-201ENST00000603116 116 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AC008739.3-201ENST00000603262 127 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AC106900.2-201ENST00000604994 317 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AC087752.4-201ENST00000605911 462 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AC012557.2-201ENST00000605919 418 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.52□□□□□ -2.01
CKAP4Q07065 AL596245.1-201ENST00000618994 362 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 AC090582.1-201ENST00000636321 199 ntBASIC2.52□□□□□ -2.01
CKAP4Q07065 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CKAP4Q07065 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CKAP4Q07065 AC092104.1-201ENST00000497346 1441 ntBASIC2.51□□□□□ -2.01
CKAP4Q07065 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CKAP4Q07065 AC026241.1-201ENST00000517873 2142 ntBASIC2.51□□□□□ -2.01
CKAP4Q07065 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.51□□□□□ -2.01
CKAP4Q07065 RNU6-859P-201ENST00000362728 107 ntBASIC2.51□□□□□ -2.01
CKAP4Q07065 RNU6-1180P-201ENST00000364935 107 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms