Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 MTND2P2-201ENST00000434633 945 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 GDI2P2-201ENST00000445131 608 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 AP004247.1-201ENST00000531556 1289 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.59□□□□□ -2.31
HSPG2P98160 AC087465.1-201ENST00000560574 245 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 FAM71BP1-201ENST00000604431 523 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 AC010200.2-201ENST00000605098 235 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 MIR924-201ENST00000638017 53 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 MIR6759-201ENST00000638110 65 ntBASIC0.59□□□□□ -2.31
HSPG2P98160 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.59□□□□□ -2.31
HSPG2P98160 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
HSPG2P98160 AC092447.6-201ENST00000414578 210 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 ZNF965P-201ENST00000432501 817 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 SNRPEP4-201ENST00000435815 279 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 HSPE1P24-201ENST00000450782 238 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 CDC42P4-201ENST00000510507 563 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 AC068714.1-201ENST00000559623 800 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 AC009902.3-201ENST00000606235 2172 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 RNU1-62P-201ENST00000362599 164 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
HSPG2P98160 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
HSPG2P98160 RNU6-225P-201ENST00000384613 103 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.59□□□□□ -2.32
HSPG2P98160 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC0.59□□□□□ -2.32
HSPG2P98160 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.59□□□□□ -2.32
HSPG2P98160 AL135752.1-201ENST00000479477 471 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.59□□□□□ -2.32
HSPG2P98160 AC008676.3-201ENST00000521237 435 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 SNRPGP15-201ENST00000600149 222 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 AL161734.1-201ENST00000609720 557 ntBASIC0.59□□□□□ -2.32
HSPG2P98160 MTND4P12-201ENST00000498999 1377 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC0.58□□□□□ -2.32
HSPG2P98160 RPS20P10-201ENST00000451209 253 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.58□□□□□ -2.32
HSPG2P98160 AC024619.4-201ENST00000580924 316 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 MIR4723-201ENST00000585070 81 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
HSPG2P98160 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.58□□□□□ -2.32
HSPG2P98160 HSFY3P-201ENST00000444242 1191 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 CCNB1IP1P3-201ENST00000454702 829 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 PMCHL2-203ENST00000457791 237 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 RNU7-157P-201ENST00000459600 66 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 RBM43P1-201ENST00000476891 1081 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.58□□□□□ -2.32
HSPG2P98160 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.58□□□□□ -2.32
HSPG2P98160 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.58□□□□□ -2.32
HSPG2P98160 AL390862.1-201ENST00000635467 1469 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC0.58□□□□□ -2.32
HSPG2P98160 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.58□□□□□ -2.32
HSPG2P98160 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.58□□□□□ -2.32
HSPG2P98160 CLIC4P1-201ENST00000453177 535 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 AC234775.1-201ENST00000454247 670 ntBASIC0.58□□□□□ -2.32
HSPG2P98160 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.58□□□□□ -2.32
HSPG2P98160 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.58□□□□□ -2.32
HSPG2P98160 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.58□□□□□ -2.32
HSPG2P98160 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.58□□□□□ -2.32
HSPG2P98160 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.57□□□□□ -2.32
HSPG2P98160 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.57□□□□□ -2.32
HSPG2P98160 RNU4-31P-201ENST00000384211 141 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 Y_RNA.518-201ENST00000384552 113 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 MTND2P9-201ENST00000422293 931 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.57□□□□□ -2.32
HSPG2P98160 AC025768.1-201ENST00000510057 267 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 SNORA48.9-201ENST00000516419 162 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.57□□□□□ -2.32
HSPG2P98160 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.57□□□□□ -2.32
HSPG2P98160 Clostridiales-1.3-201ENST00000637703 147 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 AC008163.1-202ENST00000636004 2889 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
HSPG2P98160 RNU6-1180P-201ENST00000364935 107 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.57□□□□□ -2.32
HSPG2P98160 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.57□□□□□ -2.32
HSPG2P98160 AL360221.1-201ENST00000445989 335 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 NAP1L1P3-201ENST00000462291 880 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 MRPS17P9-201ENST00000511924 393 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.57□□□□□ -2.32
HSPG2P98160 AL132857.1-201ENST00000555180 708 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
HSPG2P98160 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
HSPG2P98160 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.57□□□□□ -2.32
HSPG2P98160 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.57□□□□□ -2.32
HSPG2P98160 AC104806.1-201ENST00000508720 308 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 AC022880.1-201ENST00000534017 973 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 NBEAP1-201ENST00000554452 979 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.57□□□□□ -2.32
HSPG2P98160 AC024595.1-201ENST00000623088 387 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 SSXP10-201ENST00000402595 565 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 MIR1285-1-201ENST00000408593 84 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 RPS20P15-201ENST00000412792 311 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 OR6C66P-201ENST00000414917 930 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 MTATP6P4-201ENST00000427725 675 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 AC020699.1-201ENST00000505161 445 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 CASP1P1-201ENST00000526345 212 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 UBE2L4-201ENST00000587688 464 ntBASIC0.57□□□□□ -2.32
HSPG2P98160 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.57□□□□□ -2.32
HSPG2P98160 Y_RNA.167-201ENST00000363735 109 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 Y_RNA.412-201ENST00000384001 104 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 RNA5SP498-201ENST00000411342 120 ntBASIC0.56□□□□□ -2.32
HSPG2P98160 AC005908.1-201ENST00000468701 347 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms