Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.68□□□□□ -2.14
H3F3AP84243 ZNF849P-201ENST00000594711 1566 ntBASIC1.68□□□□□ -2.14
H3F3AP84243 RNU6-884P-201ENST00000363889 107 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 RNU6-140P-201ENST00000384566 108 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 U8.13-201ENST00000390842 128 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 AL133264.1-201ENST00000407157 562 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.67□□□□□ -2.14
H3F3AP84243 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.67□□□□□ -2.14
H3F3AP84243 EIF1AXP1-201ENST00000419267 435 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 ZNF90P2-204ENST00000419323 1075 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 HMGN2P19-201ENST00000425149 265 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 MED14P1-201ENST00000430517 648 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.67□□□□□ -2.14
H3F3AP84243 SDCBPP1-201ENST00000440192 890 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 AL513124.1-201ENST00000450410 614 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 AL353691.1-201ENST00000451332 387 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 AC013828.1-201ENST00000481845 158 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 AC026801.1-201ENST00000497178 464 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.67□□□□□ -2.14
H3F3AP84243 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.67□□□□□ -2.14
H3F3AP84243 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.67□□□□□ -2.14
H3F3AP84243 RNU2-44P-201ENST00000516795 194 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 RNA5SP291-201ENST00000517222 105 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.67□□□□□ -2.14
H3F3AP84243 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
H3F3AP84243 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.67□□□□□ -2.14
H3F3AP84243 AC110588.1-201ENST00000559699 137 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.67□□□□□ -2.14
H3F3AP84243 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.67□□□□□ -2.14
H3F3AP84243 AC103710.2-201ENST00000609912 942 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 AC010678.1-201ENST00000614118 713 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
H3F3AP84243 AC091932.3-201ENST00000624223 323 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.67□□□□□ -2.14
H3F3AP84243 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.67□□□□□ -2.14
H3F3AP84243 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.67□□□□□ -2.14
H3F3AP84243 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
H3F3AP84243 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
H3F3AP84243 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
H3F3AP84243 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
H3F3AP84243 SNORD65C-201ENST00000390962 71 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 RNU2-20P-201ENST00000410425 191 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 RNU6-1140P-201ENST00000410517 106 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 AC096649.2-201ENST00000416186 393 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 AC092634.6-201ENST00000418558 192 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.66□□□□□ -2.14
H3F3AP84243 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.66□□□□□ -2.14
H3F3AP84243 VN1R42P-201ENST00000424651 344 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 RAC1P8-201ENST00000427086 527 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 AC008850.1-201ENST00000427546 362 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.66□□□□□ -2.14
H3F3AP84243 MTND4LP7-201ENST00000431728 294 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 MICF-203ENST00000432679 129 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 VN1R10P-201ENST00000447106 875 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.66□□□□□ -2.14
H3F3AP84243 USP9YP34-201ENST00000453983 808 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.66□□□□□ -2.14
H3F3AP84243 RPL12P25-201ENST00000455592 494 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.66□□□□□ -2.14
H3F3AP84243 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.66□□□□□ -2.14
H3F3AP84243 AC118273.2-201ENST00000532092 465 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 CBX3P7-201ENST00000532876 502 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 AP000873.5-201ENST00000533906 236 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.66□□□□□ -2.14
H3F3AP84243 AC104229.1-201ENST00000561364 255 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.66□□□□□ -2.14
H3F3AP84243 AP001429.1-201ENST00000602568 530 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 AC133794.1-201ENST00000602731 914 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 AL627230.6-201ENST00000611129 280 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 AL589743.7-201ENST00000612637 233 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.66□□□□□ -2.14
H3F3AP84243 AC080188.3-201ENST00000624842 748 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 AL590396.4-201ENST00000636779 956 ntBASIC1.66□□□□□ -2.14
H3F3AP84243 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.66□□□□□ -2.14
H3F3AP84243 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
H3F3AP84243 DBF4P1-201ENST00000412976 1892 ntBASIC1.65□□□□□ -2.14
H3F3AP84243 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
H3F3AP84243 SNORA11.2-201ENST00000408318 127 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 MTCO3P1-205ENST00000422088 832 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 XKRYP1-201ENST00000423438 492 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 XKRYP2-201ENST00000432915 492 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.65□□□□□ -2.15
H3F3AP84243 MTND5P8-201ENST00000449817 1083 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 RPL21P134-201ENST00000453468 483 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 SUMO2P2-201ENST00000456482 255 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 RPL23AP42-201ENST00000471152 471 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 TRBV1-201ENST00000476502 284 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 AC108729.2-201ENST00000476543 840 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 AC107032.1-201ENST00000485945 480 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.65□□□□□ -2.15
H3F3AP84243 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.65□□□□□ -2.15
H3F3AP84243 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.65□□□□□ -2.15
H3F3AP84243 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.65□□□□□ -2.15
H3F3AP84243 AL132857.1-201ENST00000555180 708 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 MIR4529-201ENST00000578110 78 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 AC078899.2-201ENST00000595282 212 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 AL096840.1-201ENST00000603287 93 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 AC069294.1-201ENST00000608397 350 ntBASIC1.65□□□□□ -2.15
H3F3AP84243 FTX_3.1-201ENST00000610451 147 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms