Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.03□□□□□ -2.08
TPM4P67936 AP003973.1-201ENST00000604639 691 ntBASIC2.03□□□□□ -2.08
TPM4P67936 KATNBL1P5-201ENST00000605015 517 ntBASIC2.03□□□□□ -2.08
TPM4P67936 AC013476.2-201ENST00000614456 459 ntBASIC2.03□□□□□ -2.08
TPM4P67936 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
TPM4P67936 U4atac.1-201ENST00000618345 95 ntBASIC2.03□□□□□ -2.08
TPM4P67936 AL158801.5-201ENST00000623123 465 ntBASIC2.03□□□□□ -2.08
TPM4P67936 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.03□□□□□ -2.08
TPM4P67936 MIR4275-201ENST00000636486 87 ntBASIC2.03□□□□□ -2.08
TPM4P67936 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.03□□□□□ -2.09
TPM4P67936 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM4P67936 ZNF355P-201ENST00000427301 3216 ntBASIC2.02□□□□□ -2.09
TPM4P67936 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.02□□□□□ -2.09
TPM4P67936 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.02□□□□□ -2.09
TPM4P67936 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
TPM4P67936 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AL158050.1-201ENST00000416077 457 ntBASIC2.02□□□□□ -2.09
TPM4P67936 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AL121882.1-201ENST00000422893 417 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.02□□□□□ -2.09
TPM4P67936 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.02□□□□□ -2.09
TPM4P67936 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.02□□□□□ -2.09
TPM4P67936 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM4P67936 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.02□□□□□ -2.09
TPM4P67936 PMCHL2-203ENST00000457791 237 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.02□□□□□ -2.09
TPM4P67936 RPS20P20-201ENST00000460498 340 ntBASIC2.02□□□□□ -2.09
TPM4P67936 RPL9P6-201ENST00000492764 598 ntBASIC2.02□□□□□ -2.09
TPM4P67936 OR4G11P-201ENST00000492842 939 ntBASIC2.02□□□□□ -2.09
TPM4P67936 HMGB3P17-201ENST00000504195 649 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.02□□□□□ -2.09
TPM4P67936 AC010460.2-201ENST00000509054 677 ntBASIC2.02□□□□□ -2.09
TPM4P67936 MRPS17P9-201ENST00000511924 393 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AC107393.1-201ENST00000512403 346 ntBASIC2.02□□□□□ -2.09
TPM4P67936 RNU6-528P-201ENST00000516926 100 ntBASIC2.02□□□□□ -2.09
TPM4P67936 SNORA76.2-201ENST00000517095 137 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM4P67936 CBX3P7-201ENST00000532876 502 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AC007151.1-201ENST00000572774 483 ntBASIC2.02□□□□□ -2.09
TPM4P67936 MIR4529-201ENST00000578110 78 ntBASIC2.02□□□□□ -2.09
TPM4P67936 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.02□□□□□ -2.09
TPM4P67936 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
TPM4P67936 MIR4666A-201ENST00000580160 79 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AC105245.1-201ENST00000581934 244 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.02□□□□□ -2.09
TPM4P67936 AC068790.3-201ENST00000602988 553 ntBASIC2.02□□□□□ -2.09
TPM4P67936 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.02□□□□□ -2.09
TPM4P67936 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
TPM4P67936 AC104763.3-201ENST00000613765 618 ntBASIC2.02□□□□□ -2.09
TPM4P67936 YWHAEP7-203ENST00000622054 312 ntBASIC2.02□□□□□ -2.09
TPM4P67936 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
TPM4P67936 AP002791.1-201ENST00000623291 381 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AL159972.1-201ENST00000625150 448 ntBASIC2.02□□□□□ -2.09
TPM4P67936 PISRT1-201ENST00000626175 531 ntBASIC2.02□□□□□ -2.09
TPM4P67936 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.02□□□□□ -2.09
TPM4P67936 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.01□□□□□ -2.09
TPM4P67936 RNU6-481P-201ENST00000384194 107 ntBASIC2.01□□□□□ -2.09
TPM4P67936 RNU6-932P-201ENST00000391108 106 ntBASIC2.01□□□□□ -2.09
TPM4P67936 AL512604.1-201ENST00000404812 257 ntBASIC2.01□□□□□ -2.09
TPM4P67936 U6atac.2-201ENST00000408644 118 ntBASIC2.01□□□□□ -2.09
TPM4P67936 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.01□□□□□ -2.09
TPM4P67936 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.01□□□□□ -2.09
TPM4P67936 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.01□□□□□ -2.09
TPM4P67936 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.01□□□□□ -2.09
TPM4P67936 MTND3P4-201ENST00000453537 303 ntBASIC2.01□□□□□ -2.09
TPM4P67936 ATG12P2-201ENST00000456830 416 ntBASIC2.01□□□□□ -2.09
TPM4P67936 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.01□□□□□ -2.09
TPM4P67936 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.01□□□□□ -2.09
TPM4P67936 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.01□□□□□ -2.09
TPM4P67936 AC022662.1-201ENST00000580252 331 ntBASIC2.01□□□□□ -2.09
TPM4P67936 AC068276.1-201ENST00000605793 379 ntBASIC2.01□□□□□ -2.09
TPM4P67936 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.01□□□□□ -2.09
TPM4P67936 AL603758.1-201ENST00000618654 241 ntBASIC2.01□□□□□ -2.09
TPM4P67936 AL596245.1-201ENST00000618994 362 ntBASIC2.01□□□□□ -2.09
TPM4P67936 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.01□□□□□ -2.09
TPM4P67936 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2□□□□□ -2.09
TPM4P67936 RNU5E-8P-201ENST00000363502 116 ntBASIC2□□□□□ -2.09
TPM4P67936 RNU6-1066P-201ENST00000363573 105 ntBASIC2□□□□□ -2.09
TPM4P67936 SUGT1P1-201ENST00000379514 476 ntBASIC2□□□□□ -2.09
TPM4P67936 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2□□□□□ -2.09
TPM4P67936 AC019129.1-201ENST00000403786 261 ntBASIC2□□□□□ -2.09
TPM4P67936 GSTA9P-201ENST00000406231 611 ntBASIC2□□□□□ -2.09
TPM4P67936 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
TPM4P67936 RNU4-27P-201ENST00000410889 139 ntBASIC2□□□□□ -2.09
TPM4P67936 TAF13P2-201ENST00000416876 286 ntBASIC2□□□□□ -2.09
TPM4P67936 MTATP6P27-201ENST00000416987 621 ntBASIC2□□□□□ -2.09
TPM4P67936 RPL31P63-201ENST00000422565 375 ntBASIC2□□□□□ -2.09
TPM4P67936 AIMP1P2-201ENST00000425294 312 ntBASIC2□□□□□ -2.09
TPM4P67936 AC098831.1-201ENST00000440661 216 ntBASIC2□□□□□ -2.09
TPM4P67936 AL353705.4-201ENST00000449661 238 ntBASIC2□□□□□ -2.09
TPM4P67936 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2□□□□□ -2.09
TPM4P67936 RPL21P134-201ENST00000453468 483 ntBASIC2□□□□□ -2.09
TPM4P67936 MTCO1P42-201ENST00000457379 726 ntBASIC2□□□□□ -2.09
TPM4P67936 AC026410.2-201ENST00000460281 156 ntBASIC2□□□□□ -2.09
TPM4P67936 AC107032.1-201ENST00000485945 480 ntBASIC2□□□□□ -2.09
TPM4P67936 HMGB1P36-201ENST00000487709 576 ntBASIC2□□□□□ -2.09
TPM4P67936 AC007182.2-201ENST00000489251 402 ntBASIC2□□□□□ -2.09
TPM4P67936 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2□□□□□ -2.09
TPM4P67936 AC034222.1-201ENST00000494052 532 ntBASIC2□□□□□ -2.09
TPM4P67936 AF213884.2-201ENST00000510417 903 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms