Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AP000542.2-201ENST00000623199 6179 ntBASIC4.38□□□□□ -1.71
YBX1P67809 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
YBX1P67809 AC116667.1-201ENST00000604855 2072 ntBASIC4.37□□□□□ -1.71
YBX1P67809 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.37□□□□□ -1.71
YBX1P67809 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
YBX1P67809 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
YBX1P67809 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
YBX1P67809 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
YBX1P67809 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
YBX1P67809 Y_RNA.151-201ENST00000363566 112 ntBASIC4.37□□□□□ -1.71
YBX1P67809 SNORA71.2-201ENST00000364941 134 ntBASIC4.37□□□□□ -1.71
YBX1P67809 RNU6-339P-201ENST00000384310 107 ntBASIC4.37□□□□□ -1.71
YBX1P67809 Y_RNA.515-201ENST00000384535 112 ntBASIC4.37□□□□□ -1.71
YBX1P67809 MIR517A-201ENST00000385001 87 ntBASIC4.37□□□□□ -1.71
YBX1P67809 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.37□□□□□ -1.71
YBX1P67809 AC092809.3-201ENST00000415453 231 ntBASIC4.37□□□□□ -1.71
YBX1P67809 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.37□□□□□ -1.71
YBX1P67809 RPS12P10-201ENST00000427031 377 ntBASIC4.37□□□□□ -1.71
YBX1P67809 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.37□□□□□ -1.71
YBX1P67809 NEFMP1-201ENST00000443423 1006 ntBASIC4.37□□□□□ -1.71
YBX1P67809 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.37□□□□□ -1.71
YBX1P67809 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
YBX1P67809 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
YBX1P67809 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.37□□□□□ -1.71
YBX1P67809 RNU7-187P-201ENST00000458985 68 ntBASIC4.37□□□□□ -1.71
YBX1P67809 RPL21P126-201ENST00000470049 478 ntBASIC4.37□□□□□ -1.71
YBX1P67809 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.37□□□□□ -1.71
YBX1P67809 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.37□□□□□ -1.71
YBX1P67809 AC084783.1-201ENST00000565846 910 ntBASIC4.37□□□□□ -1.71
YBX1P67809 AC109446.1-201ENST00000566172 220 ntBASIC4.37□□□□□ -1.71
YBX1P67809 AC067852.4-201ENST00000590314 478 ntBASIC4.37□□□□□ -1.71
YBX1P67809 AC010201.1-201ENST00000605051 540 ntBASIC4.37□□□□□ -1.71
YBX1P67809 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
YBX1P67809 RAD17P1-201ENST00000418130 2042 ntBASIC4.37□□□□□ -1.71
YBX1P67809 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
YBX1P67809 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.37□□□□□ -1.71
YBX1P67809 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
YBX1P67809 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
YBX1P67809 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
YBX1P67809 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
YBX1P67809 MAPK10-253ENST00000641010 4072 ntBASIC4.36□□□□□ -1.71
YBX1P67809 Z73965.1-201ENST00000623412 2297 ntBASIC4.36□□□□□ -1.71
YBX1P67809 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
YBX1P67809 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
YBX1P67809 RNA5SP388-201ENST00000362584 119 ntBASIC4.36□□□□□ -1.71
YBX1P67809 RNU1-94P-201ENST00000362627 173 ntBASIC4.36□□□□□ -1.71
YBX1P67809 RNU6-45P-201ENST00000384471 107 ntBASIC4.36□□□□□ -1.71
YBX1P67809 MT-TW-201ENST00000387382 68 ntBASIC4.36□□□□□ -1.71
YBX1P67809 Z98745.1-201ENST00000402553 494 ntBASIC4.36□□□□□ -1.71
YBX1P67809 UBE2V1P4-201ENST00000425374 344 ntBASIC4.36□□□□□ -1.71
YBX1P67809 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.36□□□□□ -1.71
YBX1P67809 AL158071.1-201ENST00000430315 461 ntBASIC4.36□□□□□ -1.71
YBX1P67809 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.36□□□□□ -1.71
YBX1P67809 CYCSP43-201ENST00000438233 310 ntBASIC4.36□□□□□ -1.71
YBX1P67809 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.36□□□□□ -1.71
YBX1P67809 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
YBX1P67809 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.36□□□□□ -1.71
YBX1P67809 snoU109.4-201ENST00000458953 143 ntBASIC4.36□□□□□ -1.71
YBX1P67809 snoU13.1-201ENST00000459157 104 ntBASIC4.36□□□□□ -1.71
YBX1P67809 AC040926.1-201ENST00000530195 238 ntBASIC4.36□□□□□ -1.71
YBX1P67809 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.36□□□□□ -1.71
YBX1P67809 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.36□□□□□ -1.71
YBX1P67809 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.36□□□□□ -1.71
YBX1P67809 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.36□□□□□ -1.71
YBX1P67809 AC012119.1-201ENST00000603184 222 ntBASIC4.36□□□□□ -1.71
YBX1P67809 AC174048.1-201ENST00000603389 144 ntBASIC4.36□□□□□ -1.71
YBX1P67809 HMGN2P28-201ENST00000606102 262 ntBASIC4.36□□□□□ -1.71
YBX1P67809 AC002044.1-201ENST00000606707 158 ntBASIC4.36□□□□□ -1.71
YBX1P67809 BMS1P21-201ENST00000634565 365 ntBASIC4.36□□□□□ -1.71
YBX1P67809 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.36□□□□□ -1.71
YBX1P67809 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
YBX1P67809 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
YBX1P67809 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
YBX1P67809 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
YBX1P67809 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
YBX1P67809 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
YBX1P67809 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
YBX1P67809 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.35□□□□□ -1.71
YBX1P67809 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
YBX1P67809 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
YBX1P67809 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
YBX1P67809 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
YBX1P67809 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
YBX1P67809 Y_RNA.60-201ENST00000362831 98 ntBASIC4.35□□□□□ -1.71
YBX1P67809 SNORA20.1-201ENST00000364790 130 ntBASIC4.35□□□□□ -1.71
YBX1P67809 Y_RNA.477-201ENST00000384352 108 ntBASIC4.35□□□□□ -1.71
YBX1P67809 Y_RNA.483-201ENST00000384380 101 ntBASIC4.35□□□□□ -1.71
YBX1P67809 U3.22-201ENST00000391120 215 ntBASIC4.35□□□□□ -1.71
YBX1P67809 SNORA48.7-201ENST00000391302 135 ntBASIC4.35□□□□□ -1.71
YBX1P67809 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.35□□□□□ -1.71
YBX1P67809 CYCSP10-201ENST00000417973 294 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AC073910.1-201ENST00000445047 438 ntBASIC4.35□□□□□ -1.71
YBX1P67809 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.35□□□□□ -1.71
YBX1P67809 AL031274.1-201ENST00000450334 232 ntBASIC4.35□□□□□ -1.71
YBX1P67809 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.35□□□□□ -1.71
YBX1P67809 BX276092.4-201ENST00000452056 248 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.35□□□□□ -1.71
YBX1P67809 AC011005.2-201ENST00000487324 359 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AC022447.4-201ENST00000504053 364 ntBASIC4.35□□□□□ -1.71
YBX1P67809 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms