Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AL365204.3-201ENST00000612448 685 ntBASIC0.37□□□□□ -2.35
RPL39P62891 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
RPL39P62891 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.37□□□□□ -2.35
RPL39P62891 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC0.37□□□□□ -2.35
RPL39P62891 RNU6-392P-201ENST00000364926 101 ntBASIC0.36□□□□□ -2.35
RPL39P62891 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC0.36□□□□□ -2.35
RPL39P62891 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
RPL39P62891 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.36□□□□□ -2.35
RPL39P62891 Z82205.1-201ENST00000428456 297 ntBASIC0.36□□□□□ -2.35
RPL39P62891 AC241584.1-201ENST00000438469 1241 ntBASIC0.36□□□□□ -2.35
RPL39P62891 CALM1P1-201ENST00000442082 433 ntBASIC0.36□□□□□ -2.35
RPL39P62891 AC008379.1-201ENST00000463655 464 ntBASIC0.36□□□□□ -2.35
RPL39P62891 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC0.36□□□□□ -2.35
RPL39P62891 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.36□□□□□ -2.35
RPL39P62891 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.36□□□□□ -2.35
RPL39P62891 RPL21P5-201ENST00000554662 472 ntBASIC0.36□□□□□ -2.35
RPL39P62891 RN7SL622P-201ENST00000585292 275 ntBASIC0.36□□□□□ -2.35
RPL39P62891 AC087045.1-201ENST00000605856 382 ntBASIC0.36□□□□□ -2.35
RPL39P62891 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.36□□□□□ -2.35
RPL39P62891 AC090132.2-201ENST00000615881 347 ntBASIC0.36□□□□□ -2.35
RPL39P62891 AC012676.2-201ENST00000619258 186 ntBASIC0.36□□□□□ -2.35
RPL39P62891 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.36□□□□□ -2.35
RPL39P62891 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.36□□□□□ -2.35
RPL39P62891 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
RPL39P62891 RNU2-68P-201ENST00000410878 191 ntBASIC0.35□□□□□ -2.35
RPL39P62891 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.35□□□□□ -2.35
RPL39P62891 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.35□□□□□ -2.35
RPL39P62891 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.35□□□□□ -2.35
RPL39P62891 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.35□□□□□ -2.35
RPL39P62891 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.35□□□□□ -2.35
RPL39P62891 AC108059.3-201ENST00000456388 214 ntBASIC0.35□□□□□ -2.35
RPL39P62891 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.35□□□□□ -2.35
RPL39P62891 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.35□□□□□ -2.35
RPL39P62891 AC034244.1-201ENST00000507687 207 ntBASIC0.35□□□□□ -2.35
RPL39P62891 AC087272.1-201ENST00000523624 533 ntBASIC0.35□□□□□ -2.35
RPL39P62891 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.35□□□□□ -2.35
RPL39P62891 AC133485.1-201ENST00000567176 124 ntBASIC0.35□□□□□ -2.35
RPL39P62891 AC138907.6-201ENST00000568401 126 ntBASIC0.35□□□□□ -2.35
RPL39P62891 AC021171.1-201ENST00000603137 706 ntBASIC0.35□□□□□ -2.35
RPL39P62891 AL355812.1-201ENST00000603215 216 ntBASIC0.35□□□□□ -2.35
RPL39P62891 AC136601.2-201ENST00000604356 474 ntBASIC0.35□□□□□ -2.35
RPL39P62891 BNIP3P10-201ENST00000605360 577 ntBASIC0.35□□□□□ -2.35
RPL39P62891 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
RPL39P62891 STMN1P1-201ENST00000617809 440 ntBASIC0.35□□□□□ -2.35
RPL39P62891 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.35□□□□□ -2.35
RPL39P62891 CR848007.1-201ENST00000442354 1699 ntBASIC0.34□□□□□ -2.35
RPL39P62891 RNU6-225P-201ENST00000384613 103 ntBASIC0.34□□□□□ -2.36
RPL39P62891 RPS3AP24-201ENST00000407896 734 ntBASIC0.34□□□□□ -2.36
RPL39P62891 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.34□□□□□ -2.36
RPL39P62891 AC092473.1-201ENST00000441098 221 ntBASIC0.34□□□□□ -2.36
RPL39P62891 AC016691.1-201ENST00000441321 413 ntBASIC0.34□□□□□ -2.36
RPL39P62891 ELOCP13-201ENST00000443934 329 ntBASIC0.34□□□□□ -2.36
RPL39P62891 snoU13.3-201ENST00000459441 104 ntBASIC0.34□□□□□ -2.36
RPL39P62891 HMGB1P22-201ENST00000505315 124 ntBASIC0.34□□□□□ -2.36
RPL39P62891 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.34□□□□□ -2.36
RPL39P62891 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.34□□□□□ -2.36
RPL39P62891 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.34□□□□□ -2.36
RPL39P62891 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.34□□□□□ -2.36
RPL39P62891 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.34□□□□□ -2.36
RPL39P62891 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC0.34□□□□□ -2.36
RPL39P62891 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC0.34□□□□□ -2.36
RPL39P62891 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.34□□□□□ -2.36
RPL39P62891 AP001004.1-201ENST00000582468 324 ntBASIC0.34□□□□□ -2.36
RPL39P62891 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.34□□□□□ -2.36
RPL39P62891 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
RPL39P62891 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
RPL39P62891 RNU6-17P-201ENST00000384245 107 ntBASIC0.33□□□□□ -2.36
RPL39P62891 RNU6-18P-201ENST00000384527 107 ntBASIC0.33□□□□□ -2.36
RPL39P62891 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.33□□□□□ -2.36
RPL39P62891 TPMTP3-201ENST00000411928 735 ntBASIC0.33□□□□□ -2.36
RPL39P62891 PIGFP2-201ENST00000421400 651 ntBASIC0.33□□□□□ -2.36
RPL39P62891 AC013410.2-201ENST00000422627 201 ntBASIC0.33□□□□□ -2.36
RPL39P62891 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.33□□□□□ -2.36
RPL39P62891 AL592045.1-201ENST00000429867 352 ntBASIC0.33□□□□□ -2.36
RPL39P62891 PIGFP3-201ENST00000441918 722 ntBASIC0.33□□□□□ -2.36
RPL39P62891 RPL23AP33-201ENST00000442301 452 ntBASIC0.33□□□□□ -2.36
RPL39P62891 AL096803.2-201ENST00000450032 677 ntBASIC0.33□□□□□ -2.36
RPL39P62891 RNA5SP310-201ENST00000459084 116 ntBASIC0.33□□□□□ -2.36
RPL39P62891 AC134050.1-201ENST00000495088 933 ntBASIC0.33□□□□□ -2.36
RPL39P62891 CKS1BP2-201ENST00000497342 240 ntBASIC0.33□□□□□ -2.36
RPL39P62891 OR10V3P-201ENST00000525712 725 ntBASIC0.33□□□□□ -2.36
RPL39P62891 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.33□□□□□ -2.36
RPL39P62891 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.33□□□□□ -2.36
RPL39P62891 MTCO2P22-201ENST00000603246 681 ntBASIC0.33□□□□□ -2.36
RPL39P62891 AC016727.1-205ENST00000605437 569 ntBASIC0.33□□□□□ -2.36
RPL39P62891 snoU13.31-201ENST00000607291 104 ntBASIC0.33□□□□□ -2.36
RPL39P62891 TUG1_1.1-201ENST00000610654 145 ntBASIC0.33□□□□□ -2.36
RPL39P62891 AL512506.2-201ENST00000624472 458 ntBASIC0.33□□□□□ -2.36
RPL39P62891 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
RPL39P62891 MTND5P11-201ENST00000511037 1812 ntBASIC0.32□□□□□ -2.36
RPL39P62891 AL161781.1-201ENST00000354277 403 ntBASIC0.32□□□□□ -2.36
RPL39P62891 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
RPL39P62891 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.32□□□□□ -2.36
RPL39P62891 MIR10B-201ENST00000385011 110 ntBASIC0.32□□□□□ -2.36
RPL39P62891 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.32□□□□□ -2.36
RPL39P62891 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.32□□□□□ -2.36
RPL39P62891 AC083875.1-201ENST00000419509 405 ntBASIC0.32□□□□□ -2.36
RPL39P62891 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.32□□□□□ -2.36
RPL39P62891 SNRPEP7-201ENST00000438350 220 ntBASIC0.32□□□□□ -2.36
RPL39P62891 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.32□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 177.7 ms